Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.42■□□□□ 0.38
GDF1P27539 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.42■□□□□ 0.38
GDF1P27539 FAM210CP-201ENST00000445714 574 ntBASIC17.42■□□□□ 0.38
GDF1P27539 AC128688.1-201ENST00000487626 519 ntBASIC17.42■□□□□ 0.38
GDF1P27539 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.42■□□□□ 0.38
GDF1P27539 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.42■□□□□ 0.38
GDF1P27539 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
GDF1P27539 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.42■□□□□ 0.38
GDF1P27539 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.42■□□□□ 0.38
GDF1P27539 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
GDF1P27539 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
GDF1P27539 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
GDF1P27539 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.42■□□□□ 0.38
GDF1P27539 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GDF1P27539 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GDF1P27539 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
GDF1P27539 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.42■□□□□ 0.38
GDF1P27539 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
GDF1P27539 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
GDF1P27539 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
GDF1P27539 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GDF1P27539 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GDF1P27539 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.41■□□□□ 0.38
GDF1P27539 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GDF1P27539 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GDF1P27539 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GDF1P27539 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GDF1P27539 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.41■□□□□ 0.38
GDF1P27539 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.41■□□□□ 0.38
GDF1P27539 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
GDF1P27539 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.41■□□□□ 0.38
GDF1P27539 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GDF1P27539 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GDF1P27539 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.41■□□□□ 0.38
GDF1P27539 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.41■□□□□ 0.38
GDF1P27539 EGLN1P1-201ENST00000531623 762 ntBASIC17.41■□□□□ 0.38
GDF1P27539 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GDF1P27539 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.41■□□□□ 0.38
GDF1P27539 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
GDF1P27539 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GDF1P27539 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GDF1P27539 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.41■□□□□ 0.38
GDF1P27539 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GDF1P27539 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.41■□□□□ 0.38
GDF1P27539 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GDF1P27539 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.41■□□□□ 0.38
GDF1P27539 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.41■□□□□ 0.38
GDF1P27539 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDF1P27539 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GDF1P27539 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDF1P27539 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.4■□□□□ 0.38
GDF1P27539 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
GDF1P27539 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDF1P27539 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GDF1P27539 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GDF1P27539 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
GDF1P27539 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.4■□□□□ 0.38
GDF1P27539 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDF1P27539 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
GDF1P27539 TSPY14P-201ENST00000303979 915 ntBASIC17.4■□□□□ 0.38
GDF1P27539 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDF1P27539 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDF1P27539 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.4■□□□□ 0.38
GDF1P27539 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.4■□□□□ 0.38
GDF1P27539 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.4■□□□□ 0.38
GDF1P27539 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.4■□□□□ 0.38
GDF1P27539 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
GDF1P27539 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDF1P27539 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.4■□□□□ 0.38
GDF1P27539 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.4■□□□□ 0.38
GDF1P27539 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
GDF1P27539 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDF1P27539 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDF1P27539 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDF1P27539 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDF1P27539 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
GDF1P27539 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
GDF1P27539 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.39■□□□□ 0.38
GDF1P27539 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
GDF1P27539 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.39■□□□□ 0.37
GDF1P27539 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDF1P27539 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDF1P27539 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDF1P27539 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GDF1P27539 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.39■□□□□ 0.37
GDF1P27539 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
GDF1P27539 CCR12P-201ENST00000446203 998 ntBASIC17.39■□□□□ 0.37
GDF1P27539 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
GDF1P27539 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
GDF1P27539 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
GDF1P27539 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.39■□□□□ 0.37
GDF1P27539 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.39■□□□□ 0.37
GDF1P27539 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDF1P27539 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GDF1P27539 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDF1P27539 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.39■□□□□ 0.37
GDF1P27539 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDF1P27539 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.39■□□□□ 0.37
GDF1P27539 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.39■□□□□ 0.37
GDF1P27539 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms