Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD40P25942 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CD40P25942 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD40P25942 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD40P25942 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.56■□□□□ 0.24
CD40P25942 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.56■□□□□ 0.24
CD40P25942 AC073508.3-201ENST00000619697 1419 ntBASIC16.56■□□□□ 0.24
CD40P25942 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CD40P25942 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD40P25942 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CD40P25942 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.56■□□□□ 0.24
CD40P25942 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD40P25942 HMGA1P5-201ENST00000412453 271 ntBASIC16.56■□□□□ 0.24
CD40P25942 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.56■□□□□ 0.24
CD40P25942 AC010203.1-204ENST00000548782 407 ntBASIC16.56■□□□□ 0.24
CD40P25942 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.56■□□□□ 0.24
CD40P25942 AL023803.3-201ENST00000615559 522 ntBASIC16.56■□□□□ 0.24
CD40P25942 AC010653.2-201ENST00000623505 997 ntBASIC16.56■□□□□ 0.24
CD40P25942 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD40P25942 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CD40P25942 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
CD40P25942 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD40P25942 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CD40P25942 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.56■□□□□ 0.24
CD40P25942 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD40P25942 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD40P25942 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.55■□□□□ 0.24
CD40P25942 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CD40P25942 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD40P25942 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD40P25942 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
CD40P25942 AC092338.2-201ENST00000568827 1415 ntBASIC16.55■□□□□ 0.24
CD40P25942 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD40P25942 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD40P25942 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.55■□□□□ 0.24
CD40P25942 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.55■□□□□ 0.24
CD40P25942 AC007663.1-201ENST00000438948 1240 ntBASIC16.55■□□□□ 0.24
CD40P25942 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.55■□□□□ 0.24
CD40P25942 AL353719.1-201ENST00000566847 864 ntBASIC16.55■□□□□ 0.24
CD40P25942 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
CD40P25942 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.55■□□□□ 0.24
CD40P25942 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD40P25942 SDHAP1-207ENST00000440850 2000 ntBASIC16.55■□□□□ 0.24
CD40P25942 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.55■□□□□ 0.24
CD40P25942 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CD40P25942 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.55■□□□□ 0.24
CD40P25942 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD40P25942 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD40P25942 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD40P25942 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD40P25942 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD40P25942 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CD40P25942 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.54■□□□□ 0.24
CD40P25942 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD40P25942 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.54■□□□□ 0.24
CD40P25942 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD40P25942 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD40P25942 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.54■□□□□ 0.24
CD40P25942 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD40P25942 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.54■□□□□ 0.24
CD40P25942 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD40P25942 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.54■□□□□ 0.24
CD40P25942 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.54■□□□□ 0.24
CD40P25942 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.54■□□□□ 0.24
CD40P25942 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CD40P25942 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.54■□□□□ 0.24
CD40P25942 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.54■□□□□ 0.24
CD40P25942 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CD40P25942 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD40P25942 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CD40P25942 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.54■□□□□ 0.24
CD40P25942 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD40P25942 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD40P25942 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD40P25942 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD40P25942 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD40P25942 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD40P25942 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD40P25942 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD40P25942 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD40P25942 TREX1-205ENST00000625293 1783 ntBASIC16.54■□□□□ 0.24
CD40P25942 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD40P25942 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD40P25942 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.53■□□□□ 0.24
CD40P25942 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD40P25942 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD40P25942 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.53■□□□□ 0.24
CD40P25942 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD40P25942 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CD40P25942 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD40P25942 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD40P25942 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD40P25942 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD40P25942 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD40P25942 TSPY21P-201ENST00000433481 731 ntBASIC16.53■□□□□ 0.24
CD40P25942 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.53■□□□□ 0.24
CD40P25942 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD40P25942 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD40P25942 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.53■□□□□ 0.24
CD40P25942 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms