Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT4P19013 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT4P19013 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.26■□□□□ 0.67
KRT4P19013 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KRT4P19013 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.26■□□□□ 0.67
KRT4P19013 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KRT4P19013 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.26■□□□□ 0.67
KRT4P19013 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
KRT4P19013 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.25■□□□□ 0.67
KRT4P19013 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
KRT4P19013 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT4P19013 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT4P19013 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.25■□□□□ 0.67
KRT4P19013 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.25■□□□□ 0.67
KRT4P19013 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT4P19013 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT4P19013 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KRT4P19013 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT4P19013 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.25■□□□□ 0.67
KRT4P19013 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.25■□□□□ 0.67
KRT4P19013 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.25■□□□□ 0.67
KRT4P19013 AL354751.1-201ENST00000412768 1863 ntBASIC19.25■□□□□ 0.67
KRT4P19013 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.25■□□□□ 0.67
KRT4P19013 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.25■□□□□ 0.67
KRT4P19013 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
KRT4P19013 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT4P19013 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT4P19013 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.25■□□□□ 0.67
KRT4P19013 AC093787.1-201ENST00000450396 207 ntBASIC19.25■□□□□ 0.67
KRT4P19013 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.25■□□□□ 0.67
KRT4P19013 AC231657.2-201ENST00000624556 255 ntBASIC19.25■□□□□ 0.67
KRT4P19013 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.25■□□□□ 0.67
KRT4P19013 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT4P19013 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT4P19013 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT4P19013 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KRT4P19013 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.25■□□□□ 0.67
KRT4P19013 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
KRT4P19013 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
KRT4P19013 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT4P19013 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.25■□□□□ 0.67
KRT4P19013 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT4P19013 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT4P19013 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT4P19013 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT4P19013 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KRT4P19013 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT4P19013 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT4P19013 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT4P19013 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KRT4P19013 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT4P19013 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT4P19013 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KRT4P19013 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT4P19013 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT4P19013 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT4P19013 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT4P19013 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.24■□□□□ 0.67
KRT4P19013 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT4P19013 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KRT4P19013 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KRT4P19013 AL512625.2-201ENST00000417533 625 ntBASIC19.24■□□□□ 0.67
KRT4P19013 AC007322.1-201ENST00000426983 750 ntBASIC19.24■□□□□ 0.67
KRT4P19013 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.24■□□□□ 0.67
KRT4P19013 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KRT4P19013 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.24■□□□□ 0.67
KRT4P19013 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.24■□□□□ 0.67
KRT4P19013 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
KRT4P19013 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.24■□□□□ 0.67
KRT4P19013 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT4P19013 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.24■□□□□ 0.67
KRT4P19013 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.24■□□□□ 0.67
KRT4P19013 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT4P19013 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT4P19013 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KRT4P19013 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.23■□□□□ 0.67
KRT4P19013 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT4P19013 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT4P19013 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT4P19013 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.23■□□□□ 0.67
KRT4P19013 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
KRT4P19013 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT4P19013 AC006015.1-201ENST00000429970 570 ntBASIC19.23■□□□□ 0.67
KRT4P19013 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.23■□□□□ 0.67
KRT4P19013 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.23■□□□□ 0.67
KRT4P19013 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
KRT4P19013 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
KRT4P19013 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT4P19013 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT4P19013 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
KRT4P19013 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KRT4P19013 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
KRT4P19013 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
KRT4P19013 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT4P19013 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.22■□□□□ 0.67
KRT4P19013 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT4P19013 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT4P19013 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT4P19013 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
KRT4P19013 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms