Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LAMP1P11279 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LAMP1P11279 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LAMP1P11279 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LAMP1P11279 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LAMP1P11279 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LAMP1P11279 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LAMP1P11279 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LAMP1P11279 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.18■□□□□ 0.5
LAMP1P11279 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LAMP1P11279 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
LAMP1P11279 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LAMP1P11279 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LAMP1P11279 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LAMP1P11279 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LAMP1P11279 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LAMP1P11279 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.18■□□□□ 0.5
LAMP1P11279 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.18■□□□□ 0.5
LAMP1P11279 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LAMP1P11279 PRKY-204ENST00000533551 1019 ntBASIC18.18■□□□□ 0.5
LAMP1P11279 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.18■□□□□ 0.5
LAMP1P11279 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.18■□□□□ 0.5
LAMP1P11279 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LAMP1P11279 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LAMP1P11279 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LAMP1P11279 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.18■□□□□ 0.5
LAMP1P11279 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LAMP1P11279 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.18■□□□□ 0.5
LAMP1P11279 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LAMP1P11279 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
LAMP1P11279 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LAMP1P11279 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LAMP1P11279 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LAMP1P11279 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LAMP1P11279 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
LAMP1P11279 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.18■□□□□ 0.5
LAMP1P11279 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LAMP1P11279 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LAMP1P11279 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.17■□□□□ 0.5
LAMP1P11279 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.17■□□□□ 0.5
LAMP1P11279 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.17■□□□□ 0.5
LAMP1P11279 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
LAMP1P11279 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LAMP1P11279 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LAMP1P11279 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LAMP1P11279 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LAMP1P11279 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
LAMP1P11279 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.17■□□□□ 0.5
LAMP1P11279 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LAMP1P11279 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LAMP1P11279 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LAMP1P11279 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LAMP1P11279 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.17■□□□□ 0.5
LAMP1P11279 RNA5SP413-201ENST00000516373 109 ntBASIC18.17■□□□□ 0.5
LAMP1P11279 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.17■□□□□ 0.5
LAMP1P11279 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.17■□□□□ 0.5
LAMP1P11279 NBPF21P-201ENST00000425093 1451 ntBASIC18.17■□□□□ 0.5
LAMP1P11279 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.17■□□□□ 0.5
LAMP1P11279 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
LAMP1P11279 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LAMP1P11279 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LAMP1P11279 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LAMP1P11279 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LAMP1P11279 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.17■□□□□ 0.5
LAMP1P11279 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LAMP1P11279 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LAMP1P11279 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
LAMP1P11279 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
LAMP1P11279 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.17■□□□□ 0.5
LAMP1P11279 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LAMP1P11279 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LAMP1P11279 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LAMP1P11279 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LAMP1P11279 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LAMP1P11279 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LAMP1P11279 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.16■□□□□ 0.5
LAMP1P11279 NEFHP1-201ENST00000412845 2629 ntBASIC18.16■□□□□ 0.5
LAMP1P11279 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LAMP1P11279 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LAMP1P11279 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LAMP1P11279 FEM1AP3-201ENST00000403722 1741 ntBASIC18.16■□□□□ 0.5
LAMP1P11279 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LAMP1P11279 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LAMP1P11279 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.16■□□□□ 0.5
LAMP1P11279 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.16■□□□□ 0.5
LAMP1P11279 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.16■□□□□ 0.5
LAMP1P11279 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.16■□□□□ 0.5
LAMP1P11279 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.16■□□□□ 0.5
LAMP1P11279 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LAMP1P11279 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
LAMP1P11279 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LAMP1P11279 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LAMP1P11279 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.16■□□□□ 0.5
LAMP1P11279 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.16■□□□□ 0.5
LAMP1P11279 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LAMP1P11279 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LAMP1P11279 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LAMP1P11279 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.16■□□□□ 0.5
LAMP1P11279 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LAMP1P11279 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms