Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TPM1P09493 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
TPM1P09493 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TPM1P09493 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.14■□□□□ 0.97
TPM1P09493 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TPM1P09493 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TPM1P09493 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TPM1P09493 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
TPM1P09493 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TPM1P09493 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.13■□□□□ 0.97
TPM1P09493 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TPM1P09493 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
TPM1P09493 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.13■□□□□ 0.97
TPM1P09493 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.13■□□□□ 0.97
TPM1P09493 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TPM1P09493 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.13■□□□□ 0.97
TPM1P09493 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TPM1P09493 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.13■□□□□ 0.97
TPM1P09493 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.13■□□□□ 0.97
TPM1P09493 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TPM1P09493 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
TPM1P09493 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.13■□□□□ 0.97
TPM1P09493 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.13■□□□□ 0.97
TPM1P09493 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TPM1P09493 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.13■□□□□ 0.97
TPM1P09493 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TPM1P09493 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TPM1P09493 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TPM1P09493 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.13■□□□□ 0.97
TPM1P09493 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TPM1P09493 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TPM1P09493 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.13■□□□□ 0.97
TPM1P09493 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TPM1P09493 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.12■□□□□ 0.97
TPM1P09493 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.12■□□□□ 0.97
TPM1P09493 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TPM1P09493 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TPM1P09493 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TPM1P09493 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TPM1P09493 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TPM1P09493 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
TPM1P09493 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TPM1P09493 TFP1-202ENST00000475455 1573 ntBASIC21.12■□□□□ 0.97
TPM1P09493 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
TPM1P09493 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TPM1P09493 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TPM1P09493 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.12■□□□□ 0.97
TPM1P09493 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TPM1P09493 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TPM1P09493 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TPM1P09493 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TPM1P09493 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TPM1P09493 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.12■□□□□ 0.97
TPM1P09493 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TPM1P09493 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TPM1P09493 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
TPM1P09493 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TPM1P09493 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TPM1P09493 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TPM1P09493 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TPM1P09493 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TPM1P09493 AL390961.4-201ENST00000623958 2535 ntBASIC21.11■□□□□ 0.97
TPM1P09493 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TPM1P09493 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TPM1P09493 KRT17P1-201ENST00000399211 1546 ntBASIC21.11■□□□□ 0.97
TPM1P09493 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.11■□□□□ 0.97
TPM1P09493 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TPM1P09493 LSM12P1-201ENST00000411836 588 ntBASIC21.11■□□□□ 0.97
TPM1P09493 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.11■□□□□ 0.97
TPM1P09493 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
TPM1P09493 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.11■□□□□ 0.97
TPM1P09493 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.11■□□□□ 0.97
TPM1P09493 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.11■□□□□ 0.97
TPM1P09493 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
TPM1P09493 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TPM1P09493 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.11■□□□□ 0.97
TPM1P09493 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TPM1P09493 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TPM1P09493 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TPM1P09493 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
TPM1P09493 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TPM1P09493 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TPM1P09493 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TPM1P09493 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TPM1P09493 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TPM1P09493 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TPM1P09493 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TPM1P09493 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM1P09493 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TPM1P09493 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM1P09493 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.1■□□□□ 0.97
TPM1P09493 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM1P09493 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM1P09493 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.1■□□□□ 0.97
TPM1P09493 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TPM1P09493 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM1P09493 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.1■□□□□ 0.97
TPM1P09493 AL390719.1-204ENST00000412397 1219 ntBASIC21.1■□□□□ 0.97
TPM1P09493 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TPM1P09493 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms