Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 AC239809.2-201ENST00000415381 517 ntBASIC19.23■□□□□ 0.67
APOA4P06727 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.23■□□□□ 0.67
APOA4P06727 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
APOA4P06727 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.23■□□□□ 0.67
APOA4P06727 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
APOA4P06727 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
APOA4P06727 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APOA4P06727 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
APOA4P06727 AL161938.1-201ENST00000569833 2180 ntBASIC19.23■□□□□ 0.67
APOA4P06727 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.23■□□□□ 0.67
APOA4P06727 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
APOA4P06727 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
APOA4P06727 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
APOA4P06727 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOA4P06727 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOA4P06727 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOA4P06727 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOA4P06727 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
APOA4P06727 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOA4P06727 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOA4P06727 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
APOA4P06727 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
APOA4P06727 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOA4P06727 KRT18P29-201ENST00000397031 1267 ntBASIC19.22■□□□□ 0.67
APOA4P06727 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOA4P06727 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
APOA4P06727 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.22■□□□□ 0.67
APOA4P06727 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
APOA4P06727 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
APOA4P06727 RN7SL471P-201ENST00000580476 299 ntBASIC19.22■□□□□ 0.67
APOA4P06727 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.22■□□□□ 0.67
APOA4P06727 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.22■□□□□ 0.67
APOA4P06727 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOA4P06727 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
APOA4P06727 AL023875.1-201ENST00000640777 796 ntBASIC19.22■□□□□ 0.67
APOA4P06727 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOA4P06727 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
APOA4P06727 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOA4P06727 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOA4P06727 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
APOA4P06727 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
APOA4P06727 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOA4P06727 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
APOA4P06727 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOA4P06727 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
APOA4P06727 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOA4P06727 CROCCP3-202ENST00000420820 1947 ntBASIC19.21■□□□□ 0.67
APOA4P06727 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOA4P06727 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOA4P06727 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOA4P06727 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.21■□□□□ 0.67
APOA4P06727 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
APOA4P06727 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.21■□□□□ 0.67
APOA4P06727 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOA4P06727 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOA4P06727 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
APOA4P06727 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOA4P06727 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
APOA4P06727 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.21■□□□□ 0.67
APOA4P06727 ZNF815P-204ENST00000434898 1737 ntBASIC19.21■□□□□ 0.67
APOA4P06727 TUBB8P6-201ENST00000436895 1288 ntBASIC19.21■□□□□ 0.67
APOA4P06727 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOA4P06727 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.21■□□□□ 0.67
APOA4P06727 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
APOA4P06727 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
APOA4P06727 AC004264.1-201ENST00000608354 794 ntBASIC19.21■□□□□ 0.67
APOA4P06727 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.21■□□□□ 0.67
APOA4P06727 ITM2C-210ENST00000620962 501 ntBASIC19.21■□□□□ 0.67
APOA4P06727 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.21■□□□□ 0.67
APOA4P06727 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOA4P06727 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
APOA4P06727 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
APOA4P06727 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.21■□□□□ 0.67
APOA4P06727 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOA4P06727 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOA4P06727 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOA4P06727 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
APOA4P06727 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
APOA4P06727 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
APOA4P06727 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APOA4P06727 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
APOA4P06727 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APOA4P06727 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
APOA4P06727 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APOA4P06727 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
APOA4P06727 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
APOA4P06727 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APOA4P06727 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
APOA4P06727 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APOA4P06727 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
APOA4P06727 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
APOA4P06727 KRASP1-201ENST00000407852 552 ntBASIC19.2■□□□□ 0.66
APOA4P06727 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.2■□□□□ 0.66
APOA4P06727 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
APOA4P06727 KRT18P16-201ENST00000510337 1294 ntBASIC19.2■□□□□ 0.66
APOA4P06727 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.2■□□□□ 0.66
APOA4P06727 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
APOA4P06727 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.2■□□□□ 0.66
APOA4P06727 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.2■□□□□ 0.66
APOA4P06727 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms