Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMGN1P05114 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.38■□□□□ 0.37
HMGN1P05114 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGN1P05114 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGN1P05114 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
HMGN1P05114 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGN1P05114 KRT8P8-201ENST00000434750 1448 ntBASIC17.38■□□□□ 0.37
HMGN1P05114 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMGN1P05114 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGN1P05114 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGN1P05114 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HMGN1P05114 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGN1P05114 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGN1P05114 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGN1P05114 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HMGN1P05114 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HMGN1P05114 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HMGN1P05114 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.37■□□□□ 0.37
HMGN1P05114 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HMGN1P05114 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
HMGN1P05114 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGN1P05114 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.37■□□□□ 0.37
HMGN1P05114 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.37■□□□□ 0.37
HMGN1P05114 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.37■□□□□ 0.37
HMGN1P05114 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.37■□□□□ 0.37
HMGN1P05114 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HMGN1P05114 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HMGN1P05114 AC090164.3-201ENST00000610780 2143 ntBASIC17.37■□□□□ 0.37
HMGN1P05114 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HMGN1P05114 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGN1P05114 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGN1P05114 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGN1P05114 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HMGN1P05114 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGN1P05114 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGN1P05114 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGN1P05114 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGN1P05114 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGN1P05114 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.37■□□□□ 0.37
HMGN1P05114 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGN1P05114 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.37■□□□□ 0.37
HMGN1P05114 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
HMGN1P05114 SDHAP1-207ENST00000440850 2000 ntBASIC17.37■□□□□ 0.37
HMGN1P05114 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGN1P05114 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGN1P05114 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGN1P05114 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGN1P05114 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.36■□□□□ 0.37
HMGN1P05114 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGN1P05114 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGN1P05114 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGN1P05114 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.36■□□□□ 0.37
HMGN1P05114 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGN1P05114 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMGN1P05114 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMGN1P05114 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.36■□□□□ 0.37
HMGN1P05114 YBX1P10-201ENST00000444752 975 ntBASIC17.36■□□□□ 0.37
HMGN1P05114 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMGN1P05114 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
HMGN1P05114 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMGN1P05114 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGN1P05114 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
HMGN1P05114 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGN1P05114 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGN1P05114 WIZP1-201ENST00000531444 2299 ntBASIC17.36■□□□□ 0.37
HMGN1P05114 AP006587.1-201ENST00000534129 1502 ntBASIC17.36■□□□□ 0.37
HMGN1P05114 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.36■□□□□ 0.37
HMGN1P05114 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.36■□□□□ 0.37
HMGN1P05114 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.36■□□□□ 0.37
HMGN1P05114 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HMGN1P05114 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGN1P05114 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGN1P05114 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGN1P05114 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGN1P05114 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGN1P05114 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGN1P05114 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HMGN1P05114 AC009113.1-201ENST00000570267 2443 ntBASIC17.35■□□□□ 0.37
HMGN1P05114 BX276092.2-201ENST00000417668 665 ntBASIC17.35■□□□□ 0.37
HMGN1P05114 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGN1P05114 AF201337.1-201ENST00000520239 748 ntBASIC17.35■□□□□ 0.37
HMGN1P05114 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.35■□□□□ 0.37
HMGN1P05114 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.35■□□□□ 0.37
HMGN1P05114 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.35■□□□□ 0.37
HMGN1P05114 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGN1P05114 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGN1P05114 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HMGN1P05114 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.35■□□□□ 0.37
HMGN1P05114 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGN1P05114 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGN1P05114 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.35■□□□□ 0.37
HMGN1P05114 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.35■□□□□ 0.37
HMGN1P05114 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGN1P05114 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGN1P05114 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGN1P05114 AC005082.1-201ENST00000413042 2259 ntBASIC17.35■□□□□ 0.37
HMGN1P05114 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGN1P05114 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HMGN1P05114 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGN1P05114 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms