Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.56■□□□□ 0.4
P04436 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
P04436 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
P04436 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
P04436 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
P04436 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.55■□□□□ 0.4
P04436 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P04436 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
P04436 TSPY14P-201ENST00000303979 915 ntBASIC17.55■□□□□ 0.4
P04436 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
P04436 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.55■□□□□ 0.4
P04436 CCR12P-201ENST00000446203 998 ntBASIC17.55■□□□□ 0.4
P04436 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.55■□□□□ 0.4
P04436 KRT18P21-201ENST00000515767 1272 ntBASIC17.55■□□□□ 0.4
P04436 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.55■□□□□ 0.4
P04436 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.55■□□□□ 0.4
P04436 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
P04436 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.55■□□□□ 0.4
P04436 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.55■□□□□ 0.4
P04436 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
P04436 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
P04436 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P04436 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.55■□□□□ 0.4
P04436 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P04436 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
P04436 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P04436 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
P04436 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
P04436 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P04436 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P04436 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P04436 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.55■□□□□ 0.4
P04436 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
P04436 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.54■□□□□ 0.4
P04436 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
P04436 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
P04436 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.54■□□□□ 0.4
P04436 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
P04436 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
P04436 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
P04436 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
P04436 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.54■□□□□ 0.4
P04436 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
P04436 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
P04436 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
P04436 FAM210CP-201ENST00000445714 574 ntBASIC17.54■□□□□ 0.4
P04436 PRSS44-201ENST00000515154 1146 ntBASIC17.54■□□□□ 0.4
P04436 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
P04436 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
P04436 AC116562.4-202ENST00000641738 218 ntBASIC17.54■□□□□ 0.4
P04436 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P04436 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P04436 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
P04436 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P04436 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P04436 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P04436 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
P04436 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
P04436 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.53■□□□□ 0.4
P04436 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
P04436 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
P04436 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
P04436 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P04436 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P04436 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P04436 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.53■□□□□ 0.4
P04436 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.53■□□□□ 0.4
P04436 SLC25A1P2-201ENST00000430693 912 ntBASIC17.53■□□□□ 0.4
P04436 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.53■□□□□ 0.4
P04436 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P04436 CKBP1-201ENST00000565489 1086 ntBASIC17.53■□□□□ 0.4
P04436 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.53■□□□□ 0.4
P04436 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
P04436 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
P04436 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P04436 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.53■□□□□ 0.4
P04436 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
P04436 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.52■□□□□ 0.4
P04436 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P04436 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
P04436 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
P04436 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P04436 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
P04436 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.52■□□□□ 0.4
P04436 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P04436 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.52■□□□□ 0.4
P04436 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
P04436 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P04436 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.52■□□□□ 0.4
P04436 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
P04436 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.52■□□□□ 0.4
P04436 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
P04436 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.52■□□□□ 0.4
P04436 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
P04436 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.52■□□□□ 0.4
P04436 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
P04436 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
P04436 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.52■□□□□ 0.39
P04436 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
P04436 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms