Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFAP04085 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.93■□□□□ 0.46
PDGFAP04085 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PDGFAP04085 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.93■□□□□ 0.46
PDGFAP04085 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PDGFAP04085 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PDGFAP04085 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFAP04085 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFAP04085 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.92■□□□□ 0.46
PDGFAP04085 AC096733.2-201ENST00000609937 1394 ntBASIC17.92■□□□□ 0.46
PDGFAP04085 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFAP04085 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFAP04085 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFAP04085 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFAP04085 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFAP04085 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFAP04085 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFAP04085 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFAP04085 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFAP04085 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFAP04085 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.92■□□□□ 0.46
PDGFAP04085 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFAP04085 FAM207BP-201ENST00000447172 505 ntBASIC17.92■□□□□ 0.46
PDGFAP04085 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.92■□□□□ 0.46
PDGFAP04085 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFAP04085 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.92■□□□□ 0.46
PDGFAP04085 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFAP04085 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PDGFAP04085 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFAP04085 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.92■□□□□ 0.46
PDGFAP04085 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.92■□□□□ 0.46
PDGFAP04085 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.92■□□□□ 0.46
PDGFAP04085 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFAP04085 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.91■□□□□ 0.46
PDGFAP04085 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFAP04085 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFAP04085 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFAP04085 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.91■□□□□ 0.46
PDGFAP04085 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFAP04085 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.91■□□□□ 0.46
PDGFAP04085 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
PDGFAP04085 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFAP04085 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PDGFAP04085 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PDGFAP04085 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFAP04085 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.91■□□□□ 0.46
PDGFAP04085 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.91■□□□□ 0.46
PDGFAP04085 TSPY5P-201ENST00000426936 936 ntBASIC17.91■□□□□ 0.46
PDGFAP04085 AC007663.1-201ENST00000438948 1240 ntBASIC17.91■□□□□ 0.46
PDGFAP04085 KRT18P56-201ENST00000507275 550 ntBASIC17.91■□□□□ 0.46
PDGFAP04085 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.91■□□□□ 0.46
PDGFAP04085 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFAP04085 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
PDGFAP04085 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.91■□□□□ 0.46
PDGFAP04085 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFAP04085 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
PDGFAP04085 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.91■□□□□ 0.46
PDGFAP04085 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFAP04085 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.91■□□□□ 0.46
PDGFAP04085 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFAP04085 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFAP04085 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PDGFAP04085 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PDGFAP04085 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFAP04085 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PDGFAP04085 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.9■□□□□ 0.46
PDGFAP04085 AC018445.3-201ENST00000624177 1945 ntBASIC17.9■□□□□ 0.46
PDGFAP04085 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
PDGFAP04085 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.9■□□□□ 0.46
PDGFAP04085 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFAP04085 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.9■□□□□ 0.46
PDGFAP04085 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.9■□□□□ 0.46
PDGFAP04085 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.9■□□□□ 0.46
PDGFAP04085 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.9■□□□□ 0.46
PDGFAP04085 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.9■□□□□ 0.46
PDGFAP04085 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.9■□□□□ 0.46
PDGFAP04085 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.9■□□□□ 0.46
PDGFAP04085 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.9■□□□□ 0.46
PDGFAP04085 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.9■□□□□ 0.46
PDGFAP04085 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.9■□□□□ 0.46
PDGFAP04085 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.9■□□□□ 0.46
PDGFAP04085 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
PDGFAP04085 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.9■□□□□ 0.46
PDGFAP04085 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFAP04085 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
PDGFAP04085 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PDGFAP04085 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.9■□□□□ 0.46
PDGFAP04085 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFAP04085 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFAP04085 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFAP04085 PHGDH-210ENST00000641115 1638 ntBASIC17.9■□□□□ 0.46
PDGFAP04085 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFAP04085 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFAP04085 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFAP04085 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFAP04085 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
PDGFAP04085 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PDGFAP04085 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.46
PDGFAP04085 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.89■□□□□ 0.46
PDGFAP04085 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms