Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRGV3P03979 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TRGV3P03979 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV3P03979 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV3P03979 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV3P03979 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV3P03979 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV3P03979 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TRGV3P03979 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV3P03979 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV3P03979 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV3P03979 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV3P03979 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV3P03979 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV3P03979 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.1■□□□□ 0.01
TRGV3P03979 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV3P03979 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV3P03979 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TRGV3P03979 RPS2P55-201ENST00000397318 883 ntBASIC15.1■□□□□ 0.01
TRGV3P03979 KSR1P1-201ENST00000446298 240 ntBASIC15.1■□□□□ 0.01
TRGV3P03979 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.1■□□□□ 0.01
TRGV3P03979 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV3P03979 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV3P03979 AC107956.1-201ENST00000494359 873 ntBASIC15.1■□□□□ 0.01
TRGV3P03979 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.1■□□□□ 0.01
TRGV3P03979 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.1■□□□□ 0.01
TRGV3P03979 AC008550.1-201ENST00000511500 884 ntBASIC15.1■□□□□ 0.01
TRGV3P03979 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.1■□□□□ 0.01
TRGV3P03979 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.1■□□□□ 0.01
TRGV3P03979 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.1■□□□□ 0.01
TRGV3P03979 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.1■□□□□ 0.01
TRGV3P03979 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.1■□□□□ 0.01
TRGV3P03979 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.1■□□□□ 0.01
TRGV3P03979 AC073195.1-201ENST00000607241 877 ntBASIC15.1■□□□□ 0.01
TRGV3P03979 AL353708.3-201ENST00000610272 989 ntBASIC15.1■□□□□ 0.01
TRGV3P03979 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.1■□□□□ 0.01
TRGV3P03979 CR392000.1-201ENST00000624770 1228 ntBASIC15.1■□□□□ 0.01
TRGV3P03979 HLA-A-209ENST00000638375 975 ntBASIC15.1■□□□□ 0.01
TRGV3P03979 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRGV3P03979 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TRGV3P03979 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV3P03979 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV3P03979 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV3P03979 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV3P03979 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV3P03979 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV3P03979 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRGV3P03979 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV3P03979 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV3P03979 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.09■□□□□ 0.01
TRGV3P03979 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.09■□□□□ 0.01
TRGV3P03979 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.09■□□□□ 0.01
TRGV3P03979 AC087289.5-201ENST00000586076 3175 ntBASIC15.09■□□□□ 0.01
TRGV3P03979 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TRGV3P03979 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV3P03979 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
TRGV3P03979 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV3P03979 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV3P03979 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRGV3P03979 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV3P03979 AC012618.2-201ENST00000428058 849 ntBASIC15.09■□□□□ 0.01
TRGV3P03979 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV3P03979 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRGV3P03979 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.09■□□□□ 0.01
TRGV3P03979 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV3P03979 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.09■□□□□ 0.01
TRGV3P03979 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.09■□□□□ 0.01
TRGV3P03979 AL160286.2-201ENST00000567150 934 ntBASIC15.09■□□□□ 0.01
TRGV3P03979 AC131212.4-201ENST00000623606 975 ntBASIC15.09■□□□□ 0.01
TRGV3P03979 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV3P03979 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV3P03979 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.09■□□□□ 0.01
TRGV3P03979 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV3P03979 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV3P03979 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV3P03979 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15.09■□□□□ 0.01
TRGV3P03979 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV3P03979 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV3P03979 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV3P03979 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.09■□□□□ 0.01
TRGV3P03979 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV3P03979 KRT16P1-201ENST00000399124 1418 ntBASIC15.09■□□□□ 0.01
TRGV3P03979 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRGV3P03979 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRGV3P03979 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRGV3P03979 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
TRGV3P03979 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRGV3P03979 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
TRGV3P03979 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
TRGV3P03979 LINC01465-201ENST00000408887 1940 ntBASIC15.08■□□□□ 0
TRGV3P03979 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15.08■□□□□ 0
TRGV3P03979 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRGV3P03979 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRGV3P03979 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.08■□□□□ 0
TRGV3P03979 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
TRGV3P03979 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.08■□□□□ 0
TRGV3P03979 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.08■□□□□ 0
TRGV3P03979 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.08■□□□□ 0
TRGV3P03979 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRGV3P03979 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms