Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
APOC1P02654 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
APOC1P02654 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
APOC1P02654 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
APOC1P02654 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.94■□□□□ 0.3
APOC1P02654 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.94■□□□□ 0.3
APOC1P02654 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
APOC1P02654 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.94■□□□□ 0.3
APOC1P02654 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
APOC1P02654 SOX15-203ENST00000570788 1093 ntBASIC16.94■□□□□ 0.3
APOC1P02654 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.94■□□□□ 0.3
APOC1P02654 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
APOC1P02654 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
APOC1P02654 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
APOC1P02654 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
APOC1P02654 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
APOC1P02654 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
APOC1P02654 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.94■□□□□ 0.3
APOC1P02654 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
APOC1P02654 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
APOC1P02654 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
APOC1P02654 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
APOC1P02654 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.94■□□□□ 0.3
APOC1P02654 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
APOC1P02654 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
APOC1P02654 AC124283.5-201ENST00000624661 1809 ntBASIC16.93■□□□□ 0.3
APOC1P02654 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
APOC1P02654 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
APOC1P02654 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.93■□□□□ 0.3
APOC1P02654 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
APOC1P02654 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
APOC1P02654 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
APOC1P02654 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.93■□□□□ 0.3
APOC1P02654 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
APOC1P02654 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
APOC1P02654 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
APOC1P02654 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
APOC1P02654 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
APOC1P02654 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.93■□□□□ 0.3
APOC1P02654 TUBB8P6-201ENST00000436895 1288 ntBASIC16.93■□□□□ 0.3
APOC1P02654 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.93■□□□□ 0.3
APOC1P02654 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.93■□□□□ 0.3
APOC1P02654 PRKY-204ENST00000533551 1019 ntBASIC16.93■□□□□ 0.3
APOC1P02654 AC104771.1-201ENST00000603335 964 ntBASIC16.93■□□□□ 0.3
APOC1P02654 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.93■□□□□ 0.3
APOC1P02654 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.93■□□□□ 0.3
APOC1P02654 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.93■□□□□ 0.3
APOC1P02654 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
APOC1P02654 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
APOC1P02654 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
APOC1P02654 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
APOC1P02654 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.93■□□□□ 0.3
APOC1P02654 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
APOC1P02654 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
APOC1P02654 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
APOC1P02654 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
APOC1P02654 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
APOC1P02654 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOC1P02654 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
APOC1P02654 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOC1P02654 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOC1P02654 LINC01465-201ENST00000408887 1940 ntBASIC16.92■□□□□ 0.3
APOC1P02654 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOC1P02654 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
APOC1P02654 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOC1P02654 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
APOC1P02654 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOC1P02654 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
APOC1P02654 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.92■□□□□ 0.3
APOC1P02654 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.92■□□□□ 0.3
APOC1P02654 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.92■□□□□ 0.3
APOC1P02654 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.92■□□□□ 0.3
APOC1P02654 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
APOC1P02654 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
APOC1P02654 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
APOC1P02654 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
APOC1P02654 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
APOC1P02654 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.92■□□□□ 0.3
APOC1P02654 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
APOC1P02654 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
APOC1P02654 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.92■□□□□ 0.3
APOC1P02654 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOC1P02654 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOC1P02654 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
APOC1P02654 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOC1P02654 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOC1P02654 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
APOC1P02654 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.91■□□□□ 0.3
APOC1P02654 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
APOC1P02654 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOC1P02654 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOC1P02654 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
APOC1P02654 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOC1P02654 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.91■□□□□ 0.3
APOC1P02654 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOC1P02654 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOC1P02654 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOC1P02654 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
APOC1P02654 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
APOC1P02654 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms