Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LMNAP02545 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
LMNAP02545 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LMNAP02545 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.01■□□□□ 0.79
LMNAP02545 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LMNAP02545 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LMNAP02545 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LMNAP02545 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LMNAP02545 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LMNAP02545 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LMNAP02545 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LMNAP02545 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.01■□□□□ 0.79
LMNAP02545 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.01■□□□□ 0.79
LMNAP02545 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.01■□□□□ 0.79
LMNAP02545 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.01■□□□□ 0.79
LMNAP02545 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.01■□□□□ 0.79
LMNAP02545 AC128688.1-201ENST00000487626 519 ntBASIC20.01■□□□□ 0.79
LMNAP02545 AL691432.3-201ENST00000621860 400 ntBASIC20.01■□□□□ 0.79
LMNAP02545 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LMNAP02545 AC004408.2-201ENST00000623613 2777 ntBASIC20.01■□□□□ 0.79
LMNAP02545 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LMNAP02545 AC007225.1-201ENST00000566331 1836 ntBASIC20.01■□□□□ 0.79
LMNAP02545 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.01■□□□□ 0.79
LMNAP02545 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.01■□□□□ 0.79
LMNAP02545 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20■□□□□ 0.79
LMNAP02545 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20■□□□□ 0.79
LMNAP02545 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LMNAP02545 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20■□□□□ 0.79
LMNAP02545 AL512408.1-201ENST00000569378 2000 ntBASIC20■□□□□ 0.79
LMNAP02545 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LMNAP02545 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20■□□□□ 0.79
LMNAP02545 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LMNAP02545 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20■□□□□ 0.79
LMNAP02545 TSPY14P-201ENST00000303979 915 ntBASIC20■□□□□ 0.79
LMNAP02545 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LMNAP02545 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
LMNAP02545 NIFKP9-201ENST00000419265 221 ntBASIC20■□□□□ 0.79
LMNAP02545 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20■□□□□ 0.79
LMNAP02545 AL121906.2-201ENST00000621597 723 ntBASIC20■□□□□ 0.79
LMNAP02545 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LMNAP02545 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20■□□□□ 0.79
LMNAP02545 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
LMNAP02545 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LMNAP02545 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LMNAP02545 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LMNAP02545 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LMNAP02545 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20■□□□□ 0.79
LMNAP02545 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LMNAP02545 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
LMNAP02545 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20■□□□□ 0.79
LMNAP02545 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LMNAP02545 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LMNAP02545 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20■□□□□ 0.79
LMNAP02545 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20■□□□□ 0.79
LMNAP02545 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
LMNAP02545 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
LMNAP02545 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LMNAP02545 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LMNAP02545 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LMNAP02545 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LMNAP02545 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
LMNAP02545 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
LMNAP02545 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
LMNAP02545 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LMNAP02545 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
LMNAP02545 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.99■□□□□ 0.79
LMNAP02545 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
LMNAP02545 AC117947.1-201ENST00000427448 529 ntBASIC19.99■□□□□ 0.79
LMNAP02545 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.99■□□□□ 0.79
LMNAP02545 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.99■□□□□ 0.79
LMNAP02545 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.99■□□□□ 0.79
LMNAP02545 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LMNAP02545 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LMNAP02545 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.99■□□□□ 0.79
LMNAP02545 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LMNAP02545 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.99■□□□□ 0.79
LMNAP02545 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.99■□□□□ 0.79
LMNAP02545 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.99■□□□□ 0.79
LMNAP02545 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LMNAP02545 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LMNAP02545 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.98■□□□□ 0.79
LMNAP02545 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LMNAP02545 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LMNAP02545 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LMNAP02545 RNF152P1-201ENST00000397754 604 ntBASIC19.98■□□□□ 0.79
LMNAP02545 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.98■□□□□ 0.79
LMNAP02545 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.98■□□□□ 0.79
LMNAP02545 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.98■□□□□ 0.79
LMNAP02545 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.98■□□□□ 0.79
LMNAP02545 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.98■□□□□ 0.79
LMNAP02545 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.98■□□□□ 0.79
LMNAP02545 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LMNAP02545 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LMNAP02545 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LMNAP02545 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
LMNAP02545 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
LMNAP02545 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LMNAP02545 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.97■□□□□ 0.79
LMNAP02545 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
LMNAP02545 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms