Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 AC099398.1-201ENST00000567919 2776 ntBASIC14.43□□□□□ -0.1
HLA-DQA1P01909 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 MAG-206ENST00000597035 542 ntTSL 4 BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 AC106820.2-201ENST00000563775 3264 ntBASIC14.43□□□□□ -0.1
HLA-DQA1P01909 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 TEX21P-204ENST00000641479 1693 ntBASIC14.42□□□□□ -0.1
HLA-DQA1P01909 TSPY26P-201ENST00000476365 1326 ntBASIC14.42□□□□□ -0.1
HLA-DQA1P01909 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DQA1P01909 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA1P01909 KRT16P6-202ENST00000425692 1426 ntBASIC14.42□□□□□ -0.1
HLA-DQA1P01909 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA1P01909 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
HLA-DQA1P01909 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA1P01909 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA1P01909 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA1P01909 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DQA1P01909 IGHV3-19-201ENST00000521488 291 ntBASIC14.42□□□□□ -0.1
HLA-DQA1P01909 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
HLA-DQA1P01909 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC14.42□□□□□ -0.1
HLA-DQA1P01909 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DQA1P01909 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA1P01909 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DQA1P01909 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA1P01909 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA1P01909 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA1P01909 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DQA1P01909 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
HLA-DQA1P01909 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA1P01909 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA1P01909 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DQA1P01909 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA1P01909 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA1P01909 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA1P01909 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HLA-DQA1P01909 AC008764.6-201ENST00000595909 2069 ntBASIC14.42□□□□□ -0.1
HLA-DQA1P01909 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 AC091305.1-201ENST00000479476 895 ntBASIC14.41□□□□□ -0.1
HLA-DQA1P01909 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 KRT16P2-201ENST00000414673 1423 ntBASIC14.41□□□□□ -0.1
HLA-DQA1P01909 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DQA1P01909 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms