Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN1O95832 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CLDN1O95832 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN1O95832 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN1O95832 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN1O95832 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN1O95832 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN1O95832 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN1O95832 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN1O95832 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.13■□□□□ 0.33
CLDN1O95832 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN1O95832 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN1O95832 AL353719.1-201ENST00000566847 864 ntBASIC17.13■□□□□ 0.33
CLDN1O95832 PRELID1P1-202ENST00000567272 903 ntBASIC17.13■□□□□ 0.33
CLDN1O95832 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN1O95832 AC092119.3-201ENST00000612618 583 ntBASIC17.13■□□□□ 0.33
CLDN1O95832 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
CLDN1O95832 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN1O95832 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN1O95832 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN1O95832 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CLDN1O95832 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN1O95832 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
CLDN1O95832 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN1O95832 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN1O95832 LINC01006-201ENST00000333319 2292 ntBASIC17.13■□□□□ 0.33
CLDN1O95832 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN1O95832 KRT8P45-201ENST00000414328 1447 ntBASIC17.13■□□□□ 0.33
CLDN1O95832 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN1O95832 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN1O95832 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN1O95832 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN1O95832 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN1O95832 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN1O95832 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN1O95832 AC004870.1-201ENST00000315132 882 ntBASIC17.12■□□□□ 0.33
CLDN1O95832 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN1O95832 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN1O95832 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN1O95832 YBX1P10-201ENST00000444752 975 ntBASIC17.12■□□□□ 0.33
CLDN1O95832 KRT17P6-201ENST00000453795 1220 ntBASIC17.12■□□□□ 0.33
CLDN1O95832 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.12■□□□□ 0.33
CLDN1O95832 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDN1O95832 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.12■□□□□ 0.33
CLDN1O95832 NPAP1P7-201ENST00000613027 823 ntBASIC17.12■□□□□ 0.33
CLDN1O95832 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN1O95832 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN1O95832 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDN1O95832 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN1O95832 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CLDN1O95832 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN1O95832 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN1O95832 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN1O95832 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN1O95832 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.11■□□□□ 0.33
CLDN1O95832 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN1O95832 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CLDN1O95832 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN1O95832 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN1O95832 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN1O95832 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN1O95832 AC006128.1-201ENST00000624704 1661 ntBASIC17.11■□□□□ 0.33
CLDN1O95832 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN1O95832 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN1O95832 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN1O95832 MIR3652-201ENST00000579335 131 ntBASIC17.11■□□□□ 0.33
CLDN1O95832 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN1O95832 FEM1AP1-201ENST00000431297 1995 ntBASIC17.11■□□□□ 0.33
CLDN1O95832 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN1O95832 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN1O95832 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN1O95832 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN1O95832 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN1O95832 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN1O95832 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CLDN1O95832 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CLDN1O95832 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN1O95832 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN1O95832 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN1O95832 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN1O95832 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN1O95832 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN1O95832 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLDN1O95832 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CLDN1O95832 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN1O95832 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.1■□□□□ 0.33
CLDN1O95832 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.1■□□□□ 0.33
CLDN1O95832 AC111152.3-201ENST00000569699 673 ntBASIC17.1■□□□□ 0.33
CLDN1O95832 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.1■□□□□ 0.33
CLDN1O95832 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN1O95832 HYMAI.1-201ENST00000620949 238 ntBASIC17.1■□□□□ 0.33
CLDN1O95832 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN1O95832 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLDN1O95832 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLDN1O95832 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN1O95832 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CLDN1O95832 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN1O95832 AC092667.1-201ENST00000434301 2586 ntBASIC17.1■□□□□ 0.33
CLDN1O95832 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN1O95832 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms