Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLSTN1O94985 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CLSTN1O94985 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.21■□□□□ 0.99
CLSTN1O94985 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLSTN1O94985 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.21■□□□□ 0.99
CLSTN1O94985 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.21■□□□□ 0.99
CLSTN1O94985 AL121829.2-201ENST00000620908 328 ntBASIC21.21■□□□□ 0.99
CLSTN1O94985 ITM2C-210ENST00000620962 501 ntBASIC21.21■□□□□ 0.99
CLSTN1O94985 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.21■□□□□ 0.99
CLSTN1O94985 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLSTN1O94985 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLSTN1O94985 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLSTN1O94985 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLSTN1O94985 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLSTN1O94985 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.21■□□□□ 0.99
CLSTN1O94985 TNXA-203ENST00000507684 2038 ntBASIC21.21■□□□□ 0.99
CLSTN1O94985 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CLSTN1O94985 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLSTN1O94985 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLSTN1O94985 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.2■□□□□ 0.99
CLSTN1O94985 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.2■□□□□ 0.99
CLSTN1O94985 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.2■□□□□ 0.98
CLSTN1O94985 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CLSTN1O94985 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.2■□□□□ 0.98
CLSTN1O94985 AL158047.1-201ENST00000445918 881 ntBASIC21.2■□□□□ 0.98
CLSTN1O94985 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CLSTN1O94985 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.2■□□□□ 0.98
CLSTN1O94985 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.2■□□□□ 0.98
CLSTN1O94985 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CLSTN1O94985 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLSTN1O94985 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLSTN1O94985 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLSTN1O94985 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLSTN1O94985 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLSTN1O94985 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLSTN1O94985 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLSTN1O94985 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLSTN1O94985 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.2■□□□□ 0.98
CLSTN1O94985 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLSTN1O94985 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.19■□□□□ 0.98
CLSTN1O94985 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLSTN1O94985 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CLSTN1O94985 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLSTN1O94985 TMEM179-206ENST00000616017 1645 ntBASIC21.19■□□□□ 0.98
CLSTN1O94985 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLSTN1O94985 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CLSTN1O94985 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLSTN1O94985 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.19■□□□□ 0.98
CLSTN1O94985 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CLSTN1O94985 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLSTN1O94985 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLSTN1O94985 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLSTN1O94985 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.19■□□□□ 0.98
CLSTN1O94985 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.19■□□□□ 0.98
CLSTN1O94985 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.19■□□□□ 0.98
CLSTN1O94985 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLSTN1O94985 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.19■□□□□ 0.98
CLSTN1O94985 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.19■□□□□ 0.98
CLSTN1O94985 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CLSTN1O94985 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.19■□□□□ 0.98
CLSTN1O94985 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLSTN1O94985 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLSTN1O94985 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLSTN1O94985 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLSTN1O94985 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CLSTN1O94985 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLSTN1O94985 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CLSTN1O94985 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CLSTN1O94985 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLSTN1O94985 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLSTN1O94985 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.18■□□□□ 0.98
CLSTN1O94985 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLSTN1O94985 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLSTN1O94985 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLSTN1O94985 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLSTN1O94985 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLSTN1O94985 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLSTN1O94985 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLSTN1O94985 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.18■□□□□ 0.98
CLSTN1O94985 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLSTN1O94985 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLSTN1O94985 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLSTN1O94985 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLSTN1O94985 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CLSTN1O94985 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLSTN1O94985 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLSTN1O94985 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLSTN1O94985 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CLSTN1O94985 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.18■□□□□ 0.98
CLSTN1O94985 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLSTN1O94985 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.18■□□□□ 0.98
CLSTN1O94985 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
CLSTN1O94985 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLSTN1O94985 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLSTN1O94985 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLSTN1O94985 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLSTN1O94985 TFP1-202ENST00000475455 1573 ntBASIC21.18■□□□□ 0.98
CLSTN1O94985 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLSTN1O94985 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLSTN1O94985 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms