Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.4■□□□□ 0.38
CLPXO76031 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPXO76031 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.4■□□□□ 0.38
CLPXO76031 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPXO76031 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPXO76031 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.4■□□□□ 0.38
CLPXO76031 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPXO76031 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.4■□□□□ 0.38
CLPXO76031 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
CLPXO76031 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPXO76031 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPXO76031 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CLPXO76031 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CLPXO76031 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPXO76031 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLPXO76031 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPXO76031 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLPXO76031 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPXO76031 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPXO76031 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CLPXO76031 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPXO76031 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CLPXO76031 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CLPXO76031 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.39■□□□□ 0.38
CLPXO76031 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.39■□□□□ 0.37
CLPXO76031 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLPXO76031 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLPXO76031 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.39■□□□□ 0.37
CLPXO76031 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.39■□□□□ 0.37
CLPXO76031 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.39■□□□□ 0.37
CLPXO76031 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.39■□□□□ 0.37
CLPXO76031 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLPXO76031 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLPXO76031 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLPXO76031 AC008764.6-201ENST00000595909 2069 ntBASIC17.39■□□□□ 0.37
CLPXO76031 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.39■□□□□ 0.37
CLPXO76031 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CLPXO76031 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLPXO76031 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLPXO76031 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLPXO76031 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.39■□□□□ 0.37
CLPXO76031 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLPXO76031 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.39■□□□□ 0.37
CLPXO76031 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLPXO76031 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLPXO76031 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.39■□□□□ 0.37
CLPXO76031 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLPXO76031 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLPXO76031 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CLPXO76031 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLPXO76031 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CLPXO76031 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLPXO76031 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.38■□□□□ 0.37
CLPXO76031 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.38■□□□□ 0.37
CLPXO76031 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLPXO76031 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CLPXO76031 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLPXO76031 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.38■□□□□ 0.37
CLPXO76031 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.38■□□□□ 0.37
CLPXO76031 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.38■□□□□ 0.37
CLPXO76031 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLPXO76031 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLPXO76031 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLPXO76031 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLPXO76031 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLPXO76031 ESPNP-201ENST00000270691 2015 ntBASIC17.38■□□□□ 0.37
CLPXO76031 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.38■□□□□ 0.37
CLPXO76031 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLPXO76031 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLPXO76031 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLPXO76031 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLPXO76031 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLPXO76031 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLPXO76031 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLPXO76031 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLPXO76031 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.37■□□□□ 0.37
CLPXO76031 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CLPXO76031 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLPXO76031 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
CLPXO76031 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.37■□□□□ 0.37
CLPXO76031 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLPXO76031 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLPXO76031 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CLPXO76031 ID1-201ENST00000376105 1233 ntBASIC17.37■□□□□ 0.37
CLPXO76031 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.37■□□□□ 0.37
CLPXO76031 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.37■□□□□ 0.37
CLPXO76031 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CLPXO76031 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLPXO76031 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLPXO76031 PCDHA12-202ENST00000613593 2588 ntBASIC17.37■□□□□ 0.37
CLPXO76031 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLPXO76031 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLPXO76031 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.37■□□□□ 0.37
CLPXO76031 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLPXO76031 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLPXO76031 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLPXO76031 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLPXO76031 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLPXO76031 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.37■□□□□ 0.37
CLPXO76031 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms