Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTP4A3O75365 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTP4A3O75365 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.3■□□□□ 0.36
PTP4A3O75365 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PTP4A3O75365 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.3■□□□□ 0.36
PTP4A3O75365 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTP4A3O75365 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.3■□□□□ 0.36
PTP4A3O75365 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTP4A3O75365 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.3■□□□□ 0.36
PTP4A3O75365 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.3■□□□□ 0.36
PTP4A3O75365 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTP4A3O75365 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTP4A3O75365 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.3■□□□□ 0.36
PTP4A3O75365 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTP4A3O75365 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTP4A3O75365 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTP4A3O75365 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTP4A3O75365 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTP4A3O75365 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTP4A3O75365 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
PTP4A3O75365 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PTP4A3O75365 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTP4A3O75365 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PTP4A3O75365 POM121L13P-201ENST00000422362 380 ntBASIC17.29■□□□□ 0.36
PTP4A3O75365 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.29■□□□□ 0.36
PTP4A3O75365 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.29■□□□□ 0.36
PTP4A3O75365 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.29■□□□□ 0.36
PTP4A3O75365 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.29■□□□□ 0.36
PTP4A3O75365 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.29■□□□□ 0.36
PTP4A3O75365 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PTP4A3O75365 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.29■□□□□ 0.36
PTP4A3O75365 AC104771.1-201ENST00000603335 964 ntBASIC17.29■□□□□ 0.36
PTP4A3O75365 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTP4A3O75365 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTP4A3O75365 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
PTP4A3O75365 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTP4A3O75365 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
PTP4A3O75365 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTP4A3O75365 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTP4A3O75365 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.29■□□□□ 0.36
PTP4A3O75365 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.29■□□□□ 0.36
PTP4A3O75365 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTP4A3O75365 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.29■□□□□ 0.36
PTP4A3O75365 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTP4A3O75365 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.28■□□□□ 0.36
PTP4A3O75365 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTP4A3O75365 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.28■□□□□ 0.36
PTP4A3O75365 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTP4A3O75365 AL512353.2-201ENST00000448759 1962 ntBASIC17.28■□□□□ 0.36
PTP4A3O75365 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.28■□□□□ 0.36
PTP4A3O75365 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PTP4A3O75365 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTP4A3O75365 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
PTP4A3O75365 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.28■□□□□ 0.36
PTP4A3O75365 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.28■□□□□ 0.36
PTP4A3O75365 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTP4A3O75365 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTP4A3O75365 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.28■□□□□ 0.36
PTP4A3O75365 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTP4A3O75365 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PTP4A3O75365 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTP4A3O75365 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTP4A3O75365 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.28■□□□□ 0.36
PTP4A3O75365 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTP4A3O75365 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTP4A3O75365 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTP4A3O75365 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.28■□□□□ 0.36
PTP4A3O75365 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTP4A3O75365 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTP4A3O75365 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTP4A3O75365 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PTP4A3O75365 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTP4A3O75365 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTP4A3O75365 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTP4A3O75365 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTP4A3O75365 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.27■□□□□ 0.36
PTP4A3O75365 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTP4A3O75365 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTP4A3O75365 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTP4A3O75365 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTP4A3O75365 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTP4A3O75365 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTP4A3O75365 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTP4A3O75365 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTP4A3O75365 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTP4A3O75365 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.27■□□□□ 0.36
PTP4A3O75365 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTP4A3O75365 UNC93B5-201ENST00000530315 699 ntBASIC17.27■□□□□ 0.36
PTP4A3O75365 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.27■□□□□ 0.36
PTP4A3O75365 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTP4A3O75365 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTP4A3O75365 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTP4A3O75365 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.27■□□□□ 0.35
PTP4A3O75365 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
PTP4A3O75365 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTP4A3O75365 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
PTP4A3O75365 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTP4A3O75365 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTP4A3O75365 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
PTP4A3O75365 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms