Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.21■□□□□ 0.19
PDCD6O75340 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.21■□□□□ 0.19
PDCD6O75340 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.21■□□□□ 0.19
PDCD6O75340 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.21■□□□□ 0.19
PDCD6O75340 AC120498.8-201ENST00000614275 531 ntBASIC16.21■□□□□ 0.19
PDCD6O75340 AL121829.2-201ENST00000620908 328 ntBASIC16.21■□□□□ 0.19
PDCD6O75340 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.21■□□□□ 0.19
PDCD6O75340 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PDCD6O75340 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PDCD6O75340 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDCD6O75340 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDCD6O75340 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.21■□□□□ 0.19
PDCD6O75340 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDCD6O75340 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PDCD6O75340 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PDCD6O75340 AL031598.1-201ENST00000561511 1773 ntBASIC16.21■□□□□ 0.18
PDCD6O75340 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
PDCD6O75340 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDCD6O75340 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PDCD6O75340 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDCD6O75340 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.2■□□□□ 0.18
PDCD6O75340 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PDCD6O75340 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.2■□□□□ 0.18
PDCD6O75340 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDCD6O75340 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDCD6O75340 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDCD6O75340 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDCD6O75340 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDCD6O75340 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.2■□□□□ 0.18
PDCD6O75340 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PDCD6O75340 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PDCD6O75340 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDCD6O75340 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDCD6O75340 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDCD6O75340 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDCD6O75340 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.2■□□□□ 0.18
PDCD6O75340 Z98044.1-201ENST00000632503 1764 ntBASIC16.2■□□□□ 0.18
PDCD6O75340 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDCD6O75340 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDCD6O75340 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDCD6O75340 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDCD6O75340 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDCD6O75340 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.2■□□□□ 0.18
PDCD6O75340 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
PDCD6O75340 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PDCD6O75340 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDCD6O75340 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PDCD6O75340 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDCD6O75340 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDCD6O75340 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.19■□□□□ 0.18
PDCD6O75340 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDCD6O75340 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
PDCD6O75340 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDCD6O75340 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.19■□□□□ 0.18
PDCD6O75340 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDCD6O75340 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
PDCD6O75340 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.19■□□□□ 0.18
PDCD6O75340 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.19■□□□□ 0.18
PDCD6O75340 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
PDCD6O75340 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDCD6O75340 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDCD6O75340 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.19■□□□□ 0.18
PDCD6O75340 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDCD6O75340 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDCD6O75340 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
PDCD6O75340 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.19■□□□□ 0.18
PDCD6O75340 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.19■□□□□ 0.18
PDCD6O75340 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.19■□□□□ 0.18
PDCD6O75340 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
PDCD6O75340 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.19■□□□□ 0.18
PDCD6O75340 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.19■□□□□ 0.18
PDCD6O75340 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.19■□□□□ 0.18
PDCD6O75340 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDCD6O75340 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDCD6O75340 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDCD6O75340 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
PDCD6O75340 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PDCD6O75340 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDCD6O75340 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.19■□□□□ 0.18
PDCD6O75340 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PDCD6O75340 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
PDCD6O75340 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDCD6O75340 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDCD6O75340 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.19■□□□□ 0.18
PDCD6O75340 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDCD6O75340 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDCD6O75340 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.18■□□□□ 0.18
PDCD6O75340 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.18■□□□□ 0.18
PDCD6O75340 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDCD6O75340 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
PDCD6O75340 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PDCD6O75340 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDCD6O75340 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PDCD6O75340 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDCD6O75340 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDCD6O75340 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
PDCD6O75340 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDCD6O75340 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.18■□□□□ 0.18
PDCD6O75340 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PDCD6O75340 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms