Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.48■□□□□ 0.55
PRAMEF4O60810 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.48■□□□□ 0.55
PRAMEF4O60810 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF4O60810 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
PRAMEF4O60810 CROCCP3-202ENST00000420820 1947 ntBASIC18.48■□□□□ 0.55
PRAMEF4O60810 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF4O60810 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF4O60810 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
PRAMEF4O60810 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
PRAMEF4O60810 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
PRAMEF4O60810 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
PRAMEF4O60810 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF4O60810 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.48■□□□□ 0.55
PRAMEF4O60810 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF4O60810 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.47■□□□□ 0.55
PRAMEF4O60810 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF4O60810 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF4O60810 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF4O60810 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF4O60810 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.47■□□□□ 0.55
PRAMEF4O60810 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PRAMEF4O60810 FEM1AP3-201ENST00000403722 1741 ntBASIC18.47■□□□□ 0.55
PRAMEF4O60810 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF4O60810 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
PRAMEF4O60810 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF4O60810 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.47■□□□□ 0.55
PRAMEF4O60810 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF4O60810 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.47■□□□□ 0.55
PRAMEF4O60810 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.47■□□□□ 0.55
PRAMEF4O60810 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
PRAMEF4O60810 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.47■□□□□ 0.55
PRAMEF4O60810 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.47■□□□□ 0.55
PRAMEF4O60810 AL353708.3-201ENST00000610272 989 ntBASIC18.47■□□□□ 0.55
PRAMEF4O60810 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.47■□□□□ 0.55
PRAMEF4O60810 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF4O60810 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF4O60810 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF4O60810 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF4O60810 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF4O60810 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF4O60810 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
PRAMEF4O60810 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF4O60810 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.47■□□□□ 0.55
PRAMEF4O60810 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF4O60810 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF4O60810 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.46■□□□□ 0.55
PRAMEF4O60810 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.46■□□□□ 0.55
PRAMEF4O60810 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PRAMEF4O60810 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.46■□□□□ 0.55
PRAMEF4O60810 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF4O60810 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF4O60810 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF4O60810 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF4O60810 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF4O60810 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PRAMEF4O60810 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.46■□□□□ 0.55
PRAMEF4O60810 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.46■□□□□ 0.55
PRAMEF4O60810 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
PRAMEF4O60810 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
PRAMEF4O60810 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF4O60810 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.46■□□□□ 0.55
PRAMEF4O60810 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.46■□□□□ 0.55
PRAMEF4O60810 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF4O60810 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF4O60810 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF4O60810 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.46■□□□□ 0.55
PRAMEF4O60810 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF4O60810 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.46■□□□□ 0.54
PRAMEF4O60810 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PRAMEF4O60810 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF4O60810 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF4O60810 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF4O60810 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF4O60810 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF4O60810 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF4O60810 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF4O60810 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF4O60810 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.45■□□□□ 0.54
PRAMEF4O60810 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF4O60810 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF4O60810 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.45■□□□□ 0.54
PRAMEF4O60810 GCSHP5-201ENST00000443090 522 ntBASIC18.45■□□□□ 0.54
PRAMEF4O60810 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF4O60810 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.45■□□□□ 0.54
PRAMEF4O60810 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF4O60810 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.45■□□□□ 0.54
PRAMEF4O60810 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.45■□□□□ 0.54
PRAMEF4O60810 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PRAMEF4O60810 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF4O60810 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF4O60810 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF4O60810 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.45■□□□□ 0.54
PRAMEF4O60810 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF4O60810 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.45■□□□□ 0.54
PRAMEF4O60810 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF4O60810 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRAMEF4O60810 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRAMEF4O60810 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PRAMEF4O60810 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRAMEF4O60810 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms