Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GMDSO60547 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.96■□□□□ 0.31
GMDSO60547 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
GMDSO60547 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.96■□□□□ 0.31
GMDSO60547 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.96■□□□□ 0.31
GMDSO60547 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.96■□□□□ 0.3
GMDSO60547 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
GMDSO60547 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
GMDSO60547 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.95■□□□□ 0.3
GMDSO60547 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
GMDSO60547 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
GMDSO60547 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GMDSO60547 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GMDSO60547 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GMDSO60547 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GMDSO60547 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
GMDSO60547 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GMDSO60547 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.95■□□□□ 0.3
GMDSO60547 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.95■□□□□ 0.3
GMDSO60547 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.95■□□□□ 0.3
GMDSO60547 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.95■□□□□ 0.3
GMDSO60547 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.95■□□□□ 0.3
GMDSO60547 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.95■□□□□ 0.3
GMDSO60547 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
GMDSO60547 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GMDSO60547 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GMDSO60547 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GMDSO60547 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GMDSO60547 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
GMDSO60547 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GMDSO60547 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GMDSO60547 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
GMDSO60547 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.95■□□□□ 0.3
GMDSO60547 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GMDSO60547 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
GMDSO60547 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.95■□□□□ 0.3
GMDSO60547 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GMDSO60547 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
GMDSO60547 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GMDSO60547 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.95■□□□□ 0.3
GMDSO60547 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GMDSO60547 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
GMDSO60547 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GMDSO60547 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.94■□□□□ 0.3
GMDSO60547 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GMDSO60547 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.94■□□□□ 0.3
GMDSO60547 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.94■□□□□ 0.3
GMDSO60547 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.94■□□□□ 0.3
GMDSO60547 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.94■□□□□ 0.3
GMDSO60547 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.94■□□□□ 0.3
GMDSO60547 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GMDSO60547 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.94■□□□□ 0.3
GMDSO60547 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GMDSO60547 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
GMDSO60547 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
GMDSO60547 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.94■□□□□ 0.3
GMDSO60547 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GMDSO60547 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GMDSO60547 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
GMDSO60547 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GMDSO60547 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GMDSO60547 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GMDSO60547 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GMDSO60547 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.94■□□□□ 0.3
GMDSO60547 AC009113.1-201ENST00000570267 2443 ntBASIC16.94■□□□□ 0.3
GMDSO60547 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GMDSO60547 AC020763.4-201ENST00000623414 4170 ntBASIC16.93■□□□□ 0.3
GMDSO60547 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.93■□□□□ 0.3
GMDSO60547 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GMDSO60547 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
GMDSO60547 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.93■□□□□ 0.3
GMDSO60547 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.93■□□□□ 0.3
GMDSO60547 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GMDSO60547 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
GMDSO60547 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GMDSO60547 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GMDSO60547 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
GMDSO60547 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GMDSO60547 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.93■□□□□ 0.3
GMDSO60547 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
GMDSO60547 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.93■□□□□ 0.3
GMDSO60547 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GMDSO60547 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.93■□□□□ 0.3
GMDSO60547 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.93■□□□□ 0.3
GMDSO60547 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.93■□□□□ 0.3
GMDSO60547 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.93■□□□□ 0.3
GMDSO60547 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GMDSO60547 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GMDSO60547 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GMDSO60547 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GMDSO60547 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.93■□□□□ 0.3
GMDSO60547 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.93■□□□□ 0.3
GMDSO60547 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GMDSO60547 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GMDSO60547 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GMDSO60547 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
GMDSO60547 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GMDSO60547 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.92■□□□□ 0.3
GMDSO60547 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.92■□□□□ 0.3
GMDSO60547 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms