Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH7O60245 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDH7O60245 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH7O60245 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH7O60245 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PCDH7O60245 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH7O60245 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH7O60245 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PCDH7O60245 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.33■□□□□ 0.52
PCDH7O60245 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH7O60245 KRASP1-201ENST00000407852 552 ntBASIC18.33■□□□□ 0.52
PCDH7O60245 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
PCDH7O60245 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDH7O60245 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PCDH7O60245 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDH7O60245 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH7O60245 AL023875.1-201ENST00000640777 796 ntBASIC18.33■□□□□ 0.52
PCDH7O60245 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH7O60245 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH7O60245 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH7O60245 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH7O60245 AC093503.3-201ENST00000624917 2352 ntBASIC18.33■□□□□ 0.52
PCDH7O60245 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH7O60245 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH7O60245 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PCDH7O60245 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH7O60245 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH7O60245 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
PCDH7O60245 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PCDH7O60245 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH7O60245 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDH7O60245 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDH7O60245 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH7O60245 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDH7O60245 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH7O60245 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.32■□□□□ 0.52
PCDH7O60245 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH7O60245 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDH7O60245 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDH7O60245 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH7O60245 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH7O60245 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDH7O60245 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDH7O60245 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH7O60245 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH7O60245 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH7O60245 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDH7O60245 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDH7O60245 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH7O60245 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PCDH7O60245 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH7O60245 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PCDH7O60245 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PCDH7O60245 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH7O60245 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH7O60245 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDH7O60245 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDH7O60245 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH7O60245 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH7O60245 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH7O60245 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PCDH7O60245 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH7O60245 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH7O60245 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH7O60245 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH7O60245 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH7O60245 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PCDH7O60245 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH7O60245 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PCDH7O60245 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDH7O60245 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH7O60245 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH7O60245 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.31■□□□□ 0.52
PCDH7O60245 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH7O60245 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH7O60245 HLA-A-209ENST00000638375 975 ntBASIC18.31■□□□□ 0.52
PCDH7O60245 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH7O60245 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH7O60245 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
PCDH7O60245 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PCDH7O60245 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDH7O60245 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PCDH7O60245 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
PCDH7O60245 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
PCDH7O60245 IRX1P1-201ENST00000438849 1838 ntBASIC18.3■□□□□ 0.52
PCDH7O60245 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PCDH7O60245 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PCDH7O60245 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH7O60245 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH7O60245 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH7O60245 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
PCDH7O60245 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
PCDH7O60245 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
PCDH7O60245 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PCDH7O60245 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
PCDH7O60245 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH7O60245 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH7O60245 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH7O60245 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH7O60245 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms