Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 HYMAI.1-201ENST00000620949 238 ntBASIC22.94■■□□□ 1.26
FOXN1O15353 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.94■■□□□ 1.26
FOXN1O15353 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
FOXN1O15353 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
FOXN1O15353 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.94■■□□□ 1.26
FOXN1O15353 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
FOXN1O15353 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
FOXN1O15353 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
FOXN1O15353 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
FOXN1O15353 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
FOXN1O15353 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
FOXN1O15353 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
FOXN1O15353 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
FOXN1O15353 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
FOXN1O15353 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
FOXN1O15353 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
FOXN1O15353 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
FOXN1O15353 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC22.93■■□□□ 1.26
FOXN1O15353 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC22.93■■□□□ 1.26
FOXN1O15353 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
FOXN1O15353 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.93■■□□□ 1.26
FOXN1O15353 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
FOXN1O15353 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
FOXN1O15353 AC092720.2-201ENST00000602388 1665 ntBASIC22.93■■□□□ 1.26
FOXN1O15353 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
FOXN1O15353 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
FOXN1O15353 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
FOXN1O15353 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
FOXN1O15353 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.92■■□□□ 1.26
FOXN1O15353 SMG8-203ENST00000578922 2178 ntBASIC22.92■■□□□ 1.26
FOXN1O15353 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
FOXN1O15353 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
FOXN1O15353 PPIH-202ENST00000372549 327 ntTSL 3 BASIC22.92■■□□□ 1.26
FOXN1O15353 AL512604.3-201ENST00000569583 964 ntBASIC22.92■■□□□ 1.26
FOXN1O15353 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC22.92■■□□□ 1.26
FOXN1O15353 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
FOXN1O15353 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
FOXN1O15353 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
FOXN1O15353 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
FOXN1O15353 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.92■■□□□ 1.26
FOXN1O15353 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
FOXN1O15353 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
FOXN1O15353 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC22.91■■□□□ 1.26
FOXN1O15353 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
FOXN1O15353 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.91■■□□□ 1.26
FOXN1O15353 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
FOXN1O15353 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
FOXN1O15353 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC22.91■■□□□ 1.26
FOXN1O15353 SLC25A6P4-201ENST00000586535 553 ntBASIC22.91■■□□□ 1.26
FOXN1O15353 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
FOXN1O15353 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC22.91■■□□□ 1.26
FOXN1O15353 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
FOXN1O15353 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22.91■■□□□ 1.26
FOXN1O15353 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
FOXN1O15353 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC22.91■■□□□ 1.26
FOXN1O15353 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
FOXN1O15353 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
FOXN1O15353 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
FOXN1O15353 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC22.9■■□□□ 1.26
FOXN1O15353 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
FOXN1O15353 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
FOXN1O15353 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
FOXN1O15353 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
FOXN1O15353 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
FOXN1O15353 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
FOXN1O15353 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
FOXN1O15353 FAM220CP-201ENST00000395253 831 ntBASIC22.9■■□□□ 1.26
FOXN1O15353 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC22.9■■□□□ 1.26
FOXN1O15353 GXYLT1P6-201ENST00000456472 1187 ntBASIC22.9■■□□□ 1.26
FOXN1O15353 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
FOXN1O15353 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
FOXN1O15353 AC131212.4-201ENST00000623606 975 ntBASIC22.9■■□□□ 1.26
FOXN1O15353 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
FOXN1O15353 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
FOXN1O15353 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
FOXN1O15353 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
FOXN1O15353 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.9■■□□□ 1.26
FOXN1O15353 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC22.9■■□□□ 1.26
FOXN1O15353 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
FOXN1O15353 LINC01311-201ENST00000565162 1445 ntBASIC22.9■■□□□ 1.26
FOXN1O15353 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC22.9■■□□□ 1.26
FOXN1O15353 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
FOXN1O15353 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
FOXN1O15353 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
FOXN1O15353 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
FOXN1O15353 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.89■■□□□ 1.26
FOXN1O15353 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
FOXN1O15353 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
FOXN1O15353 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.89■■□□□ 1.26
FOXN1O15353 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.89■■□□□ 1.26
FOXN1O15353 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
FOXN1O15353 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.89■■□□□ 1.26
FOXN1O15353 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC22.89■■□□□ 1.26
FOXN1O15353 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
FOXN1O15353 AC004951.3-201ENST00000418645 1148 ntBASIC22.89■■□□□ 1.25
FOXN1O15353 AC008040.2-201ENST00000461049 708 ntBASIC22.89■■□□□ 1.25
FOXN1O15353 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC22.89■■□□□ 1.25
FOXN1O15353 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
FOXN1O15353 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
FOXN1O15353 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms