Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AP3B1O00203 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AP3B1O00203 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP3B1O00203 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.4■□□□□ 0.7
AP3B1O00203 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP3B1O00203 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP3B1O00203 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
AP3B1O00203 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
AP3B1O00203 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.39■□□□□ 0.7
AP3B1O00203 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
AP3B1O00203 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
AP3B1O00203 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
AP3B1O00203 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.39■□□□□ 0.69
AP3B1O00203 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
AP3B1O00203 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.39■□□□□ 0.69
AP3B1O00203 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP3B1O00203 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.39■□□□□ 0.69
AP3B1O00203 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP3B1O00203 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.39■□□□□ 0.69
AP3B1O00203 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
AP3B1O00203 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.39■□□□□ 0.69
AP3B1O00203 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP3B1O00203 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
AP3B1O00203 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.39■□□□□ 0.69
AP3B1O00203 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP3B1O00203 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP3B1O00203 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
AP3B1O00203 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
AP3B1O00203 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.39■□□□□ 0.69
AP3B1O00203 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP3B1O00203 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP3B1O00203 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP3B1O00203 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP3B1O00203 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.38■□□□□ 0.69
AP3B1O00203 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.38■□□□□ 0.69
AP3B1O00203 HCG11-201ENST00000411553 5696 ntBASIC19.38■□□□□ 0.69
AP3B1O00203 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP3B1O00203 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.38■□□□□ 0.69
AP3B1O00203 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.38■□□□□ 0.69
AP3B1O00203 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP3B1O00203 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
AP3B1O00203 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP3B1O00203 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP3B1O00203 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP3B1O00203 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.38■□□□□ 0.69
AP3B1O00203 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
AP3B1O00203 KRT16P5-201ENST00000455284 522 ntBASIC19.38■□□□□ 0.69
AP3B1O00203 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP3B1O00203 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.38■□□□□ 0.69
AP3B1O00203 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.38■□□□□ 0.69
AP3B1O00203 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
AP3B1O00203 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.38■□□□□ 0.69
AP3B1O00203 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.38■□□□□ 0.69
AP3B1O00203 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
AP3B1O00203 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
AP3B1O00203 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP3B1O00203 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP3B1O00203 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
AP3B1O00203 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
AP3B1O00203 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
AP3B1O00203 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
AP3B1O00203 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP3B1O00203 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP3B1O00203 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP3B1O00203 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
AP3B1O00203 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
AP3B1O00203 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP3B1O00203 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
AP3B1O00203 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.37■□□□□ 0.69
AP3B1O00203 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.37■□□□□ 0.69
AP3B1O00203 KRT18P6-201ENST00000555540 1265 ntBASIC19.37■□□□□ 0.69
AP3B1O00203 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.37■□□□□ 0.69
AP3B1O00203 HLA-A-209ENST00000638375 975 ntBASIC19.37■□□□□ 0.69
AP3B1O00203 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.37■□□□□ 0.69
AP3B1O00203 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP3B1O00203 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP3B1O00203 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP3B1O00203 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.37■□□□□ 0.69
AP3B1O00203 AL138781.2-201ENST00000617896 1843 ntBASIC19.37■□□□□ 0.69
AP3B1O00203 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP3B1O00203 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
AP3B1O00203 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP3B1O00203 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP3B1O00203 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.36■□□□□ 0.69
AP3B1O00203 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP3B1O00203 AC004408.2-201ENST00000623613 2777 ntBASIC19.36■□□□□ 0.69
AP3B1O00203 AC006333.2-201ENST00000607957 2099 ntBASIC19.36■□□□□ 0.69
AP3B1O00203 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.36■□□□□ 0.69
AP3B1O00203 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
AP3B1O00203 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
AP3B1O00203 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
AP3B1O00203 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
AP3B1O00203 AC239809.2-201ENST00000415381 517 ntBASIC19.36■□□□□ 0.69
AP3B1O00203 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.36■□□□□ 0.69
AP3B1O00203 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
AP3B1O00203 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.36■□□□□ 0.69
AP3B1O00203 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.36■□□□□ 0.69
AP3B1O00203 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.36■□□□□ 0.69
AP3B1O00203 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
AP3B1O00203 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms