Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM235A6NFC5 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM235A6NFC5 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
TMEM235A6NFC5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM235A6NFC5 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM235A6NFC5 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM235A6NFC5 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 TFP1-202ENST00000475455 1573 ntBASIC16.38■□□□□ 0.21
TMEM235A6NFC5 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 PCDHB18P-201ENST00000524813 2368 ntBASIC16.38■□□□□ 0.21
TMEM235A6NFC5 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 SDHAP1-207ENST00000440850 2000 ntBASIC16.38■□□□□ 0.21
TMEM235A6NFC5 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 AL354751.1-201ENST00000412768 1863 ntBASIC16.38■□□□□ 0.21
TMEM235A6NFC5 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 AC137761.2-201ENST00000561729 223 ntBASIC16.38■□□□□ 0.21
TMEM235A6NFC5 AC145350.3-201ENST00000569033 163 ntBASIC16.38■□□□□ 0.21
TMEM235A6NFC5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 AC008694.1-202ENST00000636953 945 ntBASIC16.38■□□□□ 0.21
TMEM235A6NFC5 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.38■□□□□ 0.21
TMEM235A6NFC5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM235A6NFC5 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM235A6NFC5 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TMEM235A6NFC5 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.37■□□□□ 0.21
TMEM235A6NFC5 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM235A6NFC5 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TMEM235A6NFC5 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM235A6NFC5 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.37■□□□□ 0.21
TMEM235A6NFC5 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM235A6NFC5 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.37■□□□□ 0.21
TMEM235A6NFC5 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM235A6NFC5 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM235A6NFC5 ZNRF2P3-201ENST00000424200 374 ntBASIC16.37■□□□□ 0.21
TMEM235A6NFC5 DUX4L16-201ENST00000555130 1264 ntBASIC16.37■□□□□ 0.21
TMEM235A6NFC5 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.37■□□□□ 0.21
TMEM235A6NFC5 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.37■□□□□ 0.21
TMEM235A6NFC5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TMEM235A6NFC5 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM235A6NFC5 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.37■□□□□ 0.21
TMEM235A6NFC5 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM235A6NFC5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM235A6NFC5 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TMEM235A6NFC5 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.37■□□□□ 0.21
TMEM235A6NFC5 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM235A6NFC5 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM235A6NFC5 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM235A6NFC5 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM235A6NFC5 LTB4R2-202ENST00000528054 3092 ntBASIC16.37■□□□□ 0.21
TMEM235A6NFC5 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM235A6NFC5 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.37■□□□□ 0.21
TMEM235A6NFC5 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM235A6NFC5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM235A6NFC5 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM235A6NFC5 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.36■□□□□ 0.21
TMEM235A6NFC5 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TMEM235A6NFC5 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM235A6NFC5 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM235A6NFC5 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM235A6NFC5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM235A6NFC5 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM235A6NFC5 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM235A6NFC5 KRT17P1-201ENST00000399211 1546 ntBASIC16.36■□□□□ 0.21
TMEM235A6NFC5 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TMEM235A6NFC5 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.36■□□□□ 0.21
TMEM235A6NFC5 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TMEM235A6NFC5 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.36■□□□□ 0.21
TMEM235A6NFC5 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.36■□□□□ 0.21
TMEM235A6NFC5 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.36■□□□□ 0.21
TMEM235A6NFC5 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.36■□□□□ 0.21
TMEM235A6NFC5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.36■□□□□ 0.21
TMEM235A6NFC5 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms