Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.88■□□□□ 0.29
MBD3L3A6NE82 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MBD3L3A6NE82 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.88■□□□□ 0.29
MBD3L3A6NE82 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
MBD3L3A6NE82 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
MBD3L3A6NE82 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.88■□□□□ 0.29
MBD3L3A6NE82 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.88■□□□□ 0.29
MBD3L3A6NE82 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MBD3L3A6NE82 AC140113.3-201ENST00000605663 199 ntBASIC16.88■□□□□ 0.29
MBD3L3A6NE82 AL023973.1-201ENST00000624619 620 ntBASIC16.88■□□□□ 0.29
MBD3L3A6NE82 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MBD3L3A6NE82 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.88■□□□□ 0.29
MBD3L3A6NE82 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MBD3L3A6NE82 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MBD3L3A6NE82 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
MBD3L3A6NE82 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.88■□□□□ 0.29
MBD3L3A6NE82 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MBD3L3A6NE82 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.88■□□□□ 0.29
MBD3L3A6NE82 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.88■□□□□ 0.29
MBD3L3A6NE82 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MBD3L3A6NE82 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MBD3L3A6NE82 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MBD3L3A6NE82 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MBD3L3A6NE82 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MBD3L3A6NE82 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MBD3L3A6NE82 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MBD3L3A6NE82 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
MBD3L3A6NE82 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MBD3L3A6NE82 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MBD3L3A6NE82 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MBD3L3A6NE82 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.87■□□□□ 0.29
MBD3L3A6NE82 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.87■□□□□ 0.29
MBD3L3A6NE82 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.87■□□□□ 0.29
MBD3L3A6NE82 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.87■□□□□ 0.29
MBD3L3A6NE82 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.87■□□□□ 0.29
MBD3L3A6NE82 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.87■□□□□ 0.29
MBD3L3A6NE82 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.87■□□□□ 0.29
MBD3L3A6NE82 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.87■□□□□ 0.29
MBD3L3A6NE82 AL441883.1-201ENST00000566170 1045 ntBASIC16.87■□□□□ 0.29
MBD3L3A6NE82 MIR4674-201ENST00000582457 87 ntBASIC16.87■□□□□ 0.29
MBD3L3A6NE82 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
MBD3L3A6NE82 AC008622.2-201ENST00000617006 1229 ntBASIC16.87■□□□□ 0.29
MBD3L3A6NE82 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MBD3L3A6NE82 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MBD3L3A6NE82 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MBD3L3A6NE82 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MBD3L3A6NE82 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
MBD3L3A6NE82 TREX1-205ENST00000625293 1783 ntBASIC16.87■□□□□ 0.29
MBD3L3A6NE82 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MBD3L3A6NE82 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
MBD3L3A6NE82 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
MBD3L3A6NE82 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.86■□□□□ 0.29
MBD3L3A6NE82 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.86■□□□□ 0.29
MBD3L3A6NE82 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MBD3L3A6NE82 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
MBD3L3A6NE82 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MBD3L3A6NE82 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MBD3L3A6NE82 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MBD3L3A6NE82 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MBD3L3A6NE82 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MBD3L3A6NE82 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
MBD3L3A6NE82 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.86■□□□□ 0.29
MBD3L3A6NE82 AC009947.2-201ENST00000444014 672 ntBASIC16.86■□□□□ 0.29
MBD3L3A6NE82 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.86■□□□□ 0.29
MBD3L3A6NE82 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MBD3L3A6NE82 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.86■□□□□ 0.29
MBD3L3A6NE82 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.86■□□□□ 0.29
MBD3L3A6NE82 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.86■□□□□ 0.29
MBD3L3A6NE82 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.86■□□□□ 0.29
MBD3L3A6NE82 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MBD3L3A6NE82 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
MBD3L3A6NE82 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
MBD3L3A6NE82 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.86■□□□□ 0.29
MBD3L3A6NE82 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
MBD3L3A6NE82 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MBD3L3A6NE82 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MBD3L3A6NE82 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.86■□□□□ 0.29
MBD3L3A6NE82 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MBD3L3A6NE82 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
MBD3L3A6NE82 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
MBD3L3A6NE82 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.85■□□□□ 0.29
MBD3L3A6NE82 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 AL031133.1-201ENST00000406807 723 ntBASIC16.85■□□□□ 0.29
MBD3L3A6NE82 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms