Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHISA3A0PJX4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHISA3A0PJX4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHISA3A0PJX4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.74■□□□□ 0.27
SHISA3A0PJX4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SHISA3A0PJX4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHISA3A0PJX4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SHISA3A0PJX4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 FEM1AP3-201ENST00000403722 1741 ntBASIC16.73■□□□□ 0.27
SHISA3A0PJX4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.73■□□□□ 0.27
SHISA3A0PJX4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHISA3A0PJX4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 AC083906.6-201ENST00000641366 219 ntBASIC16.72■□□□□ 0.27
SHISA3A0PJX4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SHISA3A0PJX4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 AC073592.3-201ENST00000625118 1834 ntBASIC16.71■□□□□ 0.27
SHISA3A0PJX4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 ESPNP-201ENST00000270691 2015 ntBASIC16.71■□□□□ 0.27
SHISA3A0PJX4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms