Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV3S1A0A5B6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.99■□□□□ 0.47
TCRBV3S1A0A5B6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.99■□□□□ 0.47
TCRBV3S1A0A5B6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 ESPNP-201ENST00000270691 2015 ntBASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TCRBV3S1A0A5B6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV3S1A0A5B6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV3S1A0A5B6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV3S1A0A5B6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV3S1A0A5B6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV3S1A0A5B6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV3S1A0A5B6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.97■□□□□ 0.47
TCRBV3S1A0A5B6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV3S1A0A5B6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV3S1A0A5B6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.97■□□□□ 0.47
TCRBV3S1A0A5B6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TCRBV3S1A0A5B6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TCRBV3S1A0A5B6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.97■□□□□ 0.47
TCRBV3S1A0A5B6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.97■□□□□ 0.47
TCRBV3S1A0A5B6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV3S1A0A5B6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV3S1A0A5B6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.97■□□□□ 0.47
TCRBV3S1A0A5B6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV3S1A0A5B6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV3S1A0A5B6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV3S1A0A5B6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV3S1A0A5B6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.97■□□□□ 0.47
TCRBV3S1A0A5B6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV3S1A0A5B6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.97■□□□□ 0.47
TCRBV3S1A0A5B6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV3S1A0A5B6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV3S1A0A5B6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
TCRBV3S1A0A5B6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV3S1A0A5B6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TCRBV3S1A0A5B6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV3S1A0A5B6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TCRBV3S1A0A5B6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV3S1A0A5B6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV3S1A0A5B6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TCRBV3S1A0A5B6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV3S1A0A5B6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.96■□□□□ 0.47
TCRBV3S1A0A5B6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.96■□□□□ 0.47
TCRBV3S1A0A5B6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.96■□□□□ 0.47
TCRBV3S1A0A5B6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.96■□□□□ 0.47
TCRBV3S1A0A5B6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV3S1A0A5B6 AC126763.1-201ENST00000552015 2118 ntBASIC17.96■□□□□ 0.47
TCRBV3S1A0A5B6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.96■□□□□ 0.47
TCRBV3S1A0A5B6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.96■□□□□ 0.47
TCRBV3S1A0A5B6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV3S1A0A5B6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV3S1A0A5B6 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV3S1A0A5B6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TCRBV3S1A0A5B6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
TCRBV3S1A0A5B6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms