Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 TFP1-202ENST00000475455 1573 ntBASIC16.9■□□□□ 0.3
TRDV1A0A1B0GX56 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.9■□□□□ 0.3
TRDV1A0A1B0GX56 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRDV1A0A1B0GX56 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRDV1A0A1B0GX56 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRDV1A0A1B0GX56 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRDV1A0A1B0GX56 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRDV1A0A1B0GX56 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.9■□□□□ 0.3
TRDV1A0A1B0GX56 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.9■□□□□ 0.3
TRDV1A0A1B0GX56 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TRDV1A0A1B0GX56 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRDV1A0A1B0GX56 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.9■□□□□ 0.3
TRDV1A0A1B0GX56 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.9■□□□□ 0.3
TRDV1A0A1B0GX56 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.9■□□□□ 0.3
TRDV1A0A1B0GX56 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.9■□□□□ 0.3
TRDV1A0A1B0GX56 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.9■□□□□ 0.3
TRDV1A0A1B0GX56 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRDV1A0A1B0GX56 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRDV1A0A1B0GX56 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRDV1A0A1B0GX56 FEM1AP3-201ENST00000403722 1741 ntBASIC16.9■□□□□ 0.3
TRDV1A0A1B0GX56 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRDV1A0A1B0GX56 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRDV1A0A1B0GX56 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRDV1A0A1B0GX56 AL162741.1-201ENST00000565563 1558 ntBASIC16.89■□□□□ 0.3
TRDV1A0A1B0GX56 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.89■□□□□ 0.3
TRDV1A0A1B0GX56 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRDV1A0A1B0GX56 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRDV1A0A1B0GX56 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRDV1A0A1B0GX56 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRDV1A0A1B0GX56 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.89■□□□□ 0.29
TRDV1A0A1B0GX56 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRDV1A0A1B0GX56 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.89■□□□□ 0.29
TRDV1A0A1B0GX56 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRDV1A0A1B0GX56 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRDV1A0A1B0GX56 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.89■□□□□ 0.29
TRDV1A0A1B0GX56 KRT18P14-201ENST00000534205 1250 ntBASIC16.89■□□□□ 0.29
TRDV1A0A1B0GX56 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.89■□□□□ 0.29
TRDV1A0A1B0GX56 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.89■□□□□ 0.29
TRDV1A0A1B0GX56 AC013268.1-206ENST00000638368 961 ntBASIC16.89■□□□□ 0.29
TRDV1A0A1B0GX56 AC112229.1-201ENST00000639295 961 ntBASIC16.89■□□□□ 0.29
TRDV1A0A1B0GX56 AC083906.6-201ENST00000641366 219 ntBASIC16.89■□□□□ 0.29
TRDV1A0A1B0GX56 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.89■□□□□ 0.29
TRDV1A0A1B0GX56 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRDV1A0A1B0GX56 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRDV1A0A1B0GX56 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRDV1A0A1B0GX56 AC073592.3-201ENST00000625118 1834 ntBASIC16.89■□□□□ 0.29
TRDV1A0A1B0GX56 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRDV1A0A1B0GX56 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRDV1A0A1B0GX56 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRDV1A0A1B0GX56 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRDV1A0A1B0GX56 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRDV1A0A1B0GX56 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRDV1A0A1B0GX56 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.88■□□□□ 0.29
TRDV1A0A1B0GX56 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.88■□□□□ 0.29
TRDV1A0A1B0GX56 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRDV1A0A1B0GX56 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
TRDV1A0A1B0GX56 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.88■□□□□ 0.29
TRDV1A0A1B0GX56 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
TRDV1A0A1B0GX56 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRDV1A0A1B0GX56 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRDV1A0A1B0GX56 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRDV1A0A1B0GX56 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TRDV1A0A1B0GX56 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRDV1A0A1B0GX56 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.88■□□□□ 0.29
TRDV1A0A1B0GX56 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.88■□□□□ 0.29
TRDV1A0A1B0GX56 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.88■□□□□ 0.29
TRDV1A0A1B0GX56 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.88■□□□□ 0.29
TRDV1A0A1B0GX56 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRDV1A0A1B0GX56 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.88■□□□□ 0.29
TRDV1A0A1B0GX56 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRDV1A0A1B0GX56 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRDV1A0A1B0GX56 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRDV1A0A1B0GX56 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.88■□□□□ 0.29
TRDV1A0A1B0GX56 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.87■□□□□ 0.29
TRDV1A0A1B0GX56 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.87■□□□□ 0.29
TRDV1A0A1B0GX56 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRDV1A0A1B0GX56 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRDV1A0A1B0GX56 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRDV1A0A1B0GX56 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRDV1A0A1B0GX56 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
TRDV1A0A1B0GX56 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.87■□□□□ 0.29
TRDV1A0A1B0GX56 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRDV1A0A1B0GX56 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRDV1A0A1B0GX56 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRDV1A0A1B0GX56 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.87■□□□□ 0.29
TRDV1A0A1B0GX56 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.87■□□□□ 0.29
TRDV1A0A1B0GX56 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.87■□□□□ 0.29
TRDV1A0A1B0GX56 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.87■□□□□ 0.29
TRDV1A0A1B0GX56 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.87■□□□□ 0.29
TRDV1A0A1B0GX56 C2orf69P4-201ENST00000565394 541 ntBASIC16.87■□□□□ 0.29
TRDV1A0A1B0GX56 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TRDV1A0A1B0GX56 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRDV1A0A1B0GX56 FZD10-202ENST00000539839 3282 ntBASIC16.87■□□□□ 0.29
TRDV1A0A1B0GX56 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRDV1A0A1B0GX56 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRDV1A0A1B0GX56 AC008764.6-201ENST00000595909 2069 ntBASIC16.87■□□□□ 0.29
TRDV1A0A1B0GX56 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRDV1A0A1B0GX56 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRDV1A0A1B0GX56 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
TRDV1A0A1B0GX56 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms