Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC22.34■■□□□ 1.17
CCDC196A0A1B0GTZ2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC196A0A1B0GTZ2 ABBA01031674.1-201ENST00000635145 728 ntBASIC22.34■■□□□ 1.17
CCDC196A0A1B0GTZ2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC196A0A1B0GTZ2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC196A0A1B0GTZ2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC196A0A1B0GTZ2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC22.34■■□□□ 1.17
CCDC196A0A1B0GTZ2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC196A0A1B0GTZ2 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC196A0A1B0GTZ2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC22.34■■□□□ 1.17
CCDC196A0A1B0GTZ2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC196A0A1B0GTZ2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC196A0A1B0GTZ2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
CCDC196A0A1B0GTZ2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
CCDC196A0A1B0GTZ2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
CCDC196A0A1B0GTZ2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CCDC196A0A1B0GTZ2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC22.33■■□□□ 1.17
CCDC196A0A1B0GTZ2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CCDC196A0A1B0GTZ2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC22.33■■□□□ 1.17
CCDC196A0A1B0GTZ2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.33■■□□□ 1.17
CCDC196A0A1B0GTZ2 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CCDC196A0A1B0GTZ2 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CCDC196A0A1B0GTZ2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.33■■□□□ 1.17
CCDC196A0A1B0GTZ2 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22.33■■□□□ 1.17
CCDC196A0A1B0GTZ2 Z99916.2-201ENST00000604037 246 ntBASIC22.33■■□□□ 1.17
CCDC196A0A1B0GTZ2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC22.33■■□□□ 1.17
CCDC196A0A1B0GTZ2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CCDC196A0A1B0GTZ2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CCDC196A0A1B0GTZ2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CCDC196A0A1B0GTZ2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CCDC196A0A1B0GTZ2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
CCDC196A0A1B0GTZ2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC22.32■■□□□ 1.16
CCDC196A0A1B0GTZ2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC196A0A1B0GTZ2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
CCDC196A0A1B0GTZ2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.32■■□□□ 1.16
CCDC196A0A1B0GTZ2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC196A0A1B0GTZ2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC22.32■■□□□ 1.16
CCDC196A0A1B0GTZ2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC22.32■■□□□ 1.16
CCDC196A0A1B0GTZ2 AC004951.3-201ENST00000418645 1148 ntBASIC22.32■■□□□ 1.16
CCDC196A0A1B0GTZ2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC22.32■■□□□ 1.16
CCDC196A0A1B0GTZ2 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC196A0A1B0GTZ2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC22.32■■□□□ 1.16
CCDC196A0A1B0GTZ2 AC113410.3-201ENST00000623366 203 ntBASIC22.32■■□□□ 1.16
CCDC196A0A1B0GTZ2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC196A0A1B0GTZ2 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC196A0A1B0GTZ2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC22.32■■□□□ 1.16
CCDC196A0A1B0GTZ2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC196A0A1B0GTZ2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC196A0A1B0GTZ2 RCC2P6-201ENST00000526625 1557 ntBASIC22.32■■□□□ 1.16
CCDC196A0A1B0GTZ2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
CCDC196A0A1B0GTZ2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC196A0A1B0GTZ2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC196A0A1B0GTZ2 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC22.31■■□□□ 1.16
CCDC196A0A1B0GTZ2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC196A0A1B0GTZ2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC22.31■■□□□ 1.16
CCDC196A0A1B0GTZ2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC196A0A1B0GTZ2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC196A0A1B0GTZ2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC196A0A1B0GTZ2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC196A0A1B0GTZ2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
CCDC196A0A1B0GTZ2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC196A0A1B0GTZ2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC22.31■■□□□ 1.16
CCDC196A0A1B0GTZ2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC22.31■■□□□ 1.16
CCDC196A0A1B0GTZ2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CCDC196A0A1B0GTZ2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC22.31■■□□□ 1.16
CCDC196A0A1B0GTZ2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC196A0A1B0GTZ2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC196A0A1B0GTZ2 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC196A0A1B0GTZ2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC196A0A1B0GTZ2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.31■■□□□ 1.16
CCDC196A0A1B0GTZ2 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC22.31■■□□□ 1.16
CCDC196A0A1B0GTZ2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC22.31■■□□□ 1.16
CCDC196A0A1B0GTZ2 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.31■■□□□ 1.16
CCDC196A0A1B0GTZ2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
CCDC196A0A1B0GTZ2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC196A0A1B0GTZ2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
CCDC196A0A1B0GTZ2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC196A0A1B0GTZ2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC196A0A1B0GTZ2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC196A0A1B0GTZ2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC22.3■■□□□ 1.16
CCDC196A0A1B0GTZ2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC196A0A1B0GTZ2 FSCN1P1-201ENST00000568912 1481 ntBASIC22.3■■□□□ 1.16
CCDC196A0A1B0GTZ2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CCDC196A0A1B0GTZ2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC196A0A1B0GTZ2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC196A0A1B0GTZ2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC196A0A1B0GTZ2 MDFI-202ENST00000373050 809 ntTSL 2 BASIC22.3■■□□□ 1.16
CCDC196A0A1B0GTZ2 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC196A0A1B0GTZ2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC22.3■■□□□ 1.16
CCDC196A0A1B0GTZ2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC22.3■■□□□ 1.16
CCDC196A0A1B0GTZ2 GRAP-204ENST00000573099 846 ntTSL 3 BASIC22.3■■□□□ 1.16
CCDC196A0A1B0GTZ2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC22.3■■□□□ 1.16
CCDC196A0A1B0GTZ2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC196A0A1B0GTZ2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC196A0A1B0GTZ2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC196A0A1B0GTZ2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC196A0A1B0GTZ2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC196A0A1B0GTZ2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC196A0A1B0GTZ2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC196A0A1B0GTZ2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms