Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 YBX1P10-201ENST00000444752 975 ntBASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 MAX-217ENST00000557277 728 ntTSL 3 BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-1A0A0K0K1D8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 AC018470.1-201ENST00000624790 3129 ntBASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 AL512625.2-201ENST00000417533 625 ntBASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 NTF6G-201ENST00000591094 616 ntBASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 AC008764.6-201ENST00000595909 2069 ntBASIC14.34□□□□□ -0.11
TRBV6-1A0A0K0K1D8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV6-1A0A0K0K1D8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
TRBV6-1A0A0K0K1D8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.33□□□□□ -0.11
TRBV6-1A0A0K0K1D8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
TRBV6-1A0A0K0K1D8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
TRBV6-1A0A0K0K1D8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV6-1A0A0K0K1D8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV6-1A0A0K0K1D8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV6-1A0A0K0K1D8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV6-1A0A0K0K1D8 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
TRBV6-1A0A0K0K1D8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-1A0A0K0K1D8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-1A0A0K0K1D8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC14.33□□□□□ -0.12
TRBV6-1A0A0K0K1D8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-1A0A0K0K1D8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-1A0A0K0K1D8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-1A0A0K0K1D8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV6-1A0A0K0K1D8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-1A0A0K0K1D8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.33□□□□□ -0.12
TRBV6-1A0A0K0K1D8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC14.33□□□□□ -0.12
TRBV6-1A0A0K0K1D8 KRT17P1-201ENST00000399211 1546 ntBASIC14.33□□□□□ -0.12
TRBV6-1A0A0K0K1D8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-1A0A0K0K1D8 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-1A0A0K0K1D8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-1A0A0K0K1D8 AL390719.1-204ENST00000412397 1219 ntBASIC14.33□□□□□ -0.12
TRBV6-1A0A0K0K1D8 SLC25A6P5-201ENST00000435663 894 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms