Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.46□□□□□ -0.1
TRAV25A0A0B4J276 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV25A0A0B4J276 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV25A0A0B4J276 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
TRAV25A0A0B4J276 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
TRAV25A0A0B4J276 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV25A0A0B4J276 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRAV25A0A0B4J276 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV25A0A0B4J276 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TRAV25A0A0B4J276 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV25A0A0B4J276 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRAV25A0A0B4J276 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TRAV25A0A0B4J276 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV25A0A0B4J276 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV25A0A0B4J276 AC011506.1-201ENST00000474329 610 ntBASIC14.45□□□□□ -0.1
TRAV25A0A0B4J276 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
TRAV25A0A0B4J276 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV25A0A0B4J276 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV25A0A0B4J276 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC14.45□□□□□ -0.1
TRAV25A0A0B4J276 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV25A0A0B4J276 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.45□□□□□ -0.1
TRAV25A0A0B4J276 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV25A0A0B4J276 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TRAV25A0A0B4J276 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV25A0A0B4J276 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV25A0A0B4J276 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV25A0A0B4J276 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TRAV25A0A0B4J276 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TRAV25A0A0B4J276 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 AC125437.2-201ENST00000625180 2167 ntBASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 MESTP1-201ENST00000404287 994 ntBASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 RBM17P1-201ENST00000453646 1190 ntBASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 AC091390.4-202ENST00000476426 537 ntBASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 AP005242.2-201ENST00000580065 1175 ntBASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 KRT8P41-201ENST00000533985 1514 ntBASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV25A0A0B4J276 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 AL355075.4-201ENST00000554988 638 ntBASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms