Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV17A0A0B4J275 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV17A0A0B4J275 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV17A0A0B4J275 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV17A0A0B4J275 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV17A0A0B4J275 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV17A0A0B4J275 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV17A0A0B4J275 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV17A0A0B4J275 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV17A0A0B4J275 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.36■□□□□ 0.37
TRAV17A0A0B4J275 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.36■□□□□ 0.37
TRAV17A0A0B4J275 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV17A0A0B4J275 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV17A0A0B4J275 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
TRAV17A0A0B4J275 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV17A0A0B4J275 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV17A0A0B4J275 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.36■□□□□ 0.37
TRAV17A0A0B4J275 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.36■□□□□ 0.37
TRAV17A0A0B4J275 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.36■□□□□ 0.37
TRAV17A0A0B4J275 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV17A0A0B4J275 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV17A0A0B4J275 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV17A0A0B4J275 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV17A0A0B4J275 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV17A0A0B4J275 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV17A0A0B4J275 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV17A0A0B4J275 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV17A0A0B4J275 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV17A0A0B4J275 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV17A0A0B4J275 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV17A0A0B4J275 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV17A0A0B4J275 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV17A0A0B4J275 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV17A0A0B4J275 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV17A0A0B4J275 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRAV17A0A0B4J275 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV17A0A0B4J275 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAV17A0A0B4J275 STARP1-201ENST00000397973 869 ntBASIC17.35■□□□□ 0.37
TRAV17A0A0B4J275 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV17A0A0B4J275 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.35■□□□□ 0.37
TRAV17A0A0B4J275 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.35■□□□□ 0.37
TRAV17A0A0B4J275 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
TRAV17A0A0B4J275 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV17A0A0B4J275 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV17A0A0B4J275 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV17A0A0B4J275 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV17A0A0B4J275 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV17A0A0B4J275 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV17A0A0B4J275 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV17A0A0B4J275 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV17A0A0B4J275 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV17A0A0B4J275 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV17A0A0B4J275 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV17A0A0B4J275 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV17A0A0B4J275 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV17A0A0B4J275 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAV17A0A0B4J275 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV17A0A0B4J275 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV17A0A0B4J275 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
TRAV17A0A0B4J275 TSPY23P-201ENST00000440136 739 ntBASIC17.34■□□□□ 0.37
TRAV17A0A0B4J275 KRT18P38-201ENST00000449496 1282 ntBASIC17.34■□□□□ 0.37
TRAV17A0A0B4J275 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAV17A0A0B4J275 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.34■□□□□ 0.37
TRAV17A0A0B4J275 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAV17A0A0B4J275 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV17A0A0B4J275 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.34■□□□□ 0.37
TRAV17A0A0B4J275 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TRAV17A0A0B4J275 AC092667.1-201ENST00000434301 2586 ntBASIC17.34■□□□□ 0.37
TRAV17A0A0B4J275 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV17A0A0B4J275 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV17A0A0B4J275 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV17A0A0B4J275 TCF3P1-201ENST00000423021 1937 ntBASIC17.33■□□□□ 0.37
TRAV17A0A0B4J275 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV17A0A0B4J275 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.33■□□□□ 0.37
TRAV17A0A0B4J275 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
TRAV17A0A0B4J275 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV17A0A0B4J275 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV17A0A0B4J275 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.33■□□□□ 0.36
TRAV17A0A0B4J275 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV17A0A0B4J275 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TRAV17A0A0B4J275 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV17A0A0B4J275 AC112907.2-201ENST00000448639 330 ntBASIC17.33■□□□□ 0.36
TRAV17A0A0B4J275 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.33■□□□□ 0.36
TRAV17A0A0B4J275 VENTXP5-201ENST00000523979 775 ntBASIC17.33■□□□□ 0.36
TRAV17A0A0B4J275 GCSHP2-201ENST00000560971 527 ntBASIC17.33■□□□□ 0.36
TRAV17A0A0B4J275 AL136038.3-201ENST00000561909 1096 ntBASIC17.33■□□□□ 0.36
TRAV17A0A0B4J275 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TRAV17A0A0B4J275 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TRAV17A0A0B4J275 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms