Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 DNM1P47-203ENST00000571780 12667 ntBASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 U3.52-201ENST00000384034 216 ntBASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 BX323845.3-201ENST00000428215 527 ntBASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 AC004938.1-201ENST00000438468 308 ntBASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 RPL26P6-201ENST00000440913 438 ntBASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 Z95327.1-201ENST00000446082 482 ntBASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 AL034369.1-201ENST00000453808 477 ntBASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 RNU6-1211P-201ENST00000459179 105 ntBASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 AC091959.1-201ENST00000495857 238 ntBASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 MTND6P8-201ENST00000503471 522 ntBASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 AC093870.1-201ENST00000506837 213 ntBASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 MTND3P25-201ENST00000509243 135 ntBASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 SNORA27.4-201ENST00000516650 95 ntBASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 AC023968.1-201ENST00000560719 475 ntBASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 RN7SL32P-201ENST00000580514 281 ntBASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 AC067852.4-201ENST00000590314 478 ntBASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 AC004805.3-201ENST00000603178 310 ntBASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 AC243654.2-201ENST00000612843 443 ntBASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 AC244100.4-201ENST00000617747 388 ntBASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 AC008873.1-201ENST00000625051 138 ntBASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
VPS9D1Q9Y2B5 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 ZNF826P-207ENST00000622273 1910 ntBASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 AP000432.2-201ENST00000624164 2048 ntBASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 RNU6-270P-201ENST00000364131 105 ntBASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 Y_RNA.571-201ENST00000384753 98 ntBASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 SNORA12.2-201ENST00000391040 156 ntBASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 AL357139.1-201ENST00000407792 426 ntBASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 RNU4-65P-201ENST00000410473 140 ntBASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 RPL12P17-201ENST00000432393 498 ntBASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 RNU6-352P-201ENST00000516908 107 ntBASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 RN7SKP60-201ENST00000516985 239 ntBASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 AC009318.2-201ENST00000610917 651 ntBASIC6.42□□□□□ -1.38
VPS9D1Q9Y2B5 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms