RNA–Protein interactions for RNA: ENST00000516908.1

RNU6-352P-201, Transcript of RNA, U6 small nuclear 352, pseudogene, humanhuman

BASIC

Gene RNU6-352P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-352P-201ENST00000516908 AEBP2Q6ZN18 517 aaPredicted RBP14.49□□□□□ -0.09
RNU6-352P-201ENST00000516908 CHIC1Q5VXU3 224 aa14.37□□□□□ -0.11
RNU6-352P-201ENST00000516908 PHF23Q9BUL5 403 aaPredicted RBP12.72□□□□□ -0.37
RNU6-352P-201ENST00000516908 SENP3Q9H4L4 574 aaPredicted RBP12.16□□□□□ -0.46
RNU6-352P-201ENST00000516908 PLPPR3Q6T4P5 718 aa11.75□□□□□ -0.53
RNU6-352P-201ENST00000516908 FOXD1Q16676 465 aa11.31□□□□□ -0.6
RNU6-352P-201ENST00000516908 PPP6R1Q9UPN7 881 aa11.14□□□□□ -0.63
RNU6-352P-201ENST00000516908 ADRA2BP18089 450 aa11.13□□□□□ -0.63
RNU6-352P-201ENST00000516908 PIAS4Q8N2W9 510 aaPredicted RBP10.7□□□□□ -0.7
RNU6-352P-201ENST00000516908 KCNA4P22459 653 aa10.52□□□□□ -0.73
RNU6-352P-201ENST00000516908 PPP4R3CPQ6ZMV5 832 aa10.42□□□□□ -0.74
RNU6-352P-201ENST00000516908 MSH5O43196 834 aa10.25□□□□□ -0.77
RNU6-352P-201ENST00000516908 NCBP3Q53F19 620 aaKnown RBP10.17□□□□□ -0.78
RNU6-352P-201ENST00000516908 NPM3O75607 178 aaKnown RBP10.09□□□□□ -0.79
RNU6-352P-201ENST00000516908 EHMT2Q96KQ7 1210 aa10.09□□□□□ -0.79
RNU6-352P-201ENST00000516908 SCAF1Q9H7N4 1312 aaKnown RBP10.07□□□□□ -0.8
RNU6-352P-201ENST00000516908 CNKSR2Q8WXI2 1034 aa10.04□□□□□ -0.8
RNU6-352P-201ENST00000516908 MAPK8IP2Q13387 824 aaPredicted RBP10.03□□□□□ -0.8
RNU6-352P-201ENST00000516908 SLC4A1APQ9BWU0 796 aaKnown RBP10.03□□□□□ -0.8
RNU6-352P-201ENST00000516908 CSRNP3Q8WYN3 585 aa9.87□□□□□ -0.83
RNU6-352P-201ENST00000516908 NISCHQ9Y2I1 1504 aa9.8□□□□□ -0.84
RNU6-352P-201ENST00000516908 RNF216Q9NWF9 866 aaPredicted RBP9.78□□□□□ -0.84
RNU6-352P-201ENST00000516908 DMRT2Q9Y5R5 561 aa9.77□□□□□ -0.85
RNU6-352P-201ENST00000516908 ZBTB22O15209 634 aa9.72□□□□□ -0.85
RNU6-352P-201ENST00000516908 DNAJC5BQ9UF47 199 aa9.72□□□□□ -0.85
RNU6-352P-201ENST00000516908 HOXD11P31277 338 aaPredicted RBP9.69□□□□□ -0.86
RNU6-352P-201ENST00000516908 FOXD4L1Q9NU39 408 aa9.56□□□□□ -0.88
RNU6-352P-201ENST00000516908 SLC4A2P04920 1241 aa9.49□□□□□ -0.89
RNU6-352P-201ENST00000516908 DCAF8L1A6NGE4 600 aa9.33□□□□□ -0.92
RNU6-352P-201ENST00000516908 MYCNP04198 464 aaPredicted RBP9.27□□□□□ -0.93
RNU6-352P-201ENST00000516908 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.21□□□□□ -0.94
RNU6-352P-201ENST00000516908 ATXN8OSP0DMR3 200 aa9.18□□□□□ -0.94
RNU6-352P-201ENST00000516908 U3KPZ7 1027 aaPredicted RBP9.14□□□□□ -0.95
RNU6-352P-201ENST00000516908 ATF5Q9Y2D1 282 aaPredicted RBP9.09□□□□□ -0.95
RNU6-352P-201ENST00000516908 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.02□□□□□ -0.97
RNU6-352P-201ENST00000516908 HNRNPUL2Q1KMD3 747 aaKnown RBP9.02□□□□□ -0.97
RNU6-352P-201ENST00000516908 SAMD1Q6SPF0 538 aaPredicted RBP9.02□□□□□ -0.97
RNU6-352P-201ENST00000516908 POTEDQ86YR6 584 aa8.92□□□□□ -0.98
RNU6-352P-201ENST00000516908 FKBP8Q14318 412 aa8.87□□□□□ -0.99
RNU6-352P-201ENST00000516908 RNF39Q9H2S5 420 aa8.86□□□□□ -0.99
RNU6-352P-201ENST00000516908 ZNF219Q9P2Y4 722 aaPredicted RBP8.85□□□□□ -0.99
RNU6-352P-201ENST00000516908 APLP2Q06481 763 aa8.83□□□□□ -1
RNU6-352P-201ENST00000516908 SPINK5Q9NQ38 1064 aaPredicted RBP8.81□□□□□ -1
RNU6-352P-201ENST00000516908 TRHP20396 242 aaPredicted RBP8.75□□□□□ -1.01
RNU6-352P-201ENST00000516908 CCDC180Q9P1Z9 1646 aa8.73□□□□□ -1.01
RNU6-352P-201ENST00000516908 C1QBPQ07021 282 aaKnown RBP8.73□□□□□ -1.01
RNU6-352P-201ENST00000516908 CAPN15O75808 1086 aa8.71□□□□□ -1.02
RNU6-352P-201ENST00000516908 MKRN4PQ13434 485 aaPredicted RBP8.7□□□□□ -1.02
RNU6-352P-201ENST00000516908 POLA2Q14181 598 aa8.67□□□□□ -1.02
RNU6-352P-201ENST00000516908 ABCB7O75027 752 aa8.61□□□□□ -1.03
RNU6-352P-201ENST00000516908 ABCC9O60706 1549 aa8.6□□□□□ -1.03
RNU6-352P-201ENST00000516908 FBLN2P98095 1184 aa8.59□□□□□ -1.03
RNU6-352P-201ENST00000516908 SPDYE4A6NLX3 237 aa8.58□□□□□ -1.04
RNU6-352P-201ENST00000516908 RTN4Q9NQC3 1192 aaKnown RBP8.58□□□□□ -1.04
RNU6-352P-201ENST00000516908 DSG3P32926 999 aa8.53□□□□□ -1.04
RNU6-352P-201ENST00000516908 AMER1Q5JTC6 1135 aaPredicted RBP8.52□□□□□ -1.05
RNU6-352P-201ENST00000516908 PROM2Q8N271 834 aa8.5□□□□□ -1.05
RNU6-352P-201ENST00000516908 ZBTB12Q9Y330 459 aaPredicted RBP8.48□□□□□ -1.05
RNU6-352P-201ENST00000516908 CACNB1Q02641 598 aaPredicted RBP8.41□□□□□ -1.06
RNU6-352P-201ENST00000516908 FBXO3Q9UK99 471 aa8.41□□□□□ -1.06
RNU6-352P-201ENST00000516908 OSCARQ8IYS5 282 aa8.38□□□□□ -1.07
RNU6-352P-201ENST00000516908 VASPP50552 380 aaPredicted RBP8.35□□□□□ -1.07
RNU6-352P-201ENST00000516908 ZNF692Q9BU19 519 aaPredicted RBP8.34□□□□□ -1.07
RNU6-352P-201ENST00000516908 SPDYE2BA6NHP3 402 aa8.31□□□□□ -1.08
RNU6-352P-201ENST00000516908 SPDYE6P0CI01 402 aa8.31□□□□□ -1.08
RNU6-352P-201ENST00000516908 SPDYE2Q495Y8 402 aa8.31□□□□□ -1.08
RNU6-352P-201ENST00000516908 SSUH2Q9Y2M2 353 aa8.31□□□□□ -1.08
RNU6-352P-201ENST00000516908 IFNLR1Q8IU57 520 aaPredicted RBP8.28□□□□□ -1.08
RNU6-352P-201ENST00000516908 PABPN1Q86U42 306 aaKnown RBP eCLIP8.25□□□□□ -1.09
RNU6-352P-201ENST00000516908 UNC13AQ9UPW8 1703 aa8.22□□□□□ -1.09
RNU6-352P-201ENST00000516908 ZCCHC6Q5VYS8 1495 aaKnown RBP8.19□□□□□ -1.1
RNU6-352P-201ENST00000516908 STAG3Q9UJ98 1225 aa8.17□□□□□ -1.1
RNU6-352P-201ENST00000516908 RB1CC1Q8TDY2 1594 aa8.17□□□□□ -1.1
RNU6-352P-201ENST00000516908 SLC24A1O60721 1099 aa8.16□□□□□ -1.1
RNU6-352P-201ENST00000516908 NACADO15069 1562 aa8.14□□□□□ -1.11
RNU6-352P-201ENST00000516908 PKD2Q13563 968 aa8.12□□□□□ -1.11
RNU6-352P-201ENST00000516908 KLHL34Q8N239 644 aa8.12□□□□□ -1.11
RNU6-352P-201ENST00000516908 PLCD3Q8N3E9 789 aa8.11□□□□□ -1.11
RNU6-352P-201ENST00000516908 MIER1Q8N108 512 aa8.1□□□□□ -1.11
RNU6-352P-201ENST00000516908 SPOCK2Q92563 424 aa8.1□□□□□ -1.11
RNU6-352P-201ENST00000516908 BICRAQ9NZM4 1560 aa8.09□□□□□ -1.11
RNU6-352P-201ENST00000516908 DCAF8L2P0C7V8 631 aa8.08□□□□□ -1.12
RNU6-352P-201ENST00000516908 SCRIBQ14160 1630 aa8.06□□□□□ -1.12
RNU6-352P-201ENST00000516908 RBM42Q9BTD8 480 aaKnown RBP8.05□□□□□ -1.12
RNU6-352P-201ENST00000516908 AKT1S1Q96B36 256 aa8.04□□□□□ -1.12
RNU6-352P-201ENST00000516908 MYO15BQ96JP2 1530 aa8.03□□□□□ -1.12
RNU6-352P-201ENST00000516908 DCAF1Q9Y4B6 1507 aa8.03□□□□□ -1.12
RNU6-352P-201ENST00000516908 REM2Q8IYK8 340 aaPredicted RBP8□□□□□ -1.13
RNU6-352P-201ENST00000516908 SPDYE1Q8NFV5 336 aaPredicted RBP8□□□□□ -1.13
RNU6-352P-201ENST00000516908 ECM2O94769 699 aaPredicted RBP7.97□□□□□ -1.13
RNU6-352P-201ENST00000516908 CLEC11AQ9Y240 323 aa7.97□□□□□ -1.13
RNU6-352P-201ENST00000516908 PLEKHG5O94827 1062 aa7.96□□□□□ -1.14
RNU6-352P-201ENST00000516908 ZBTB47Q9UFB7 747 aaPredicted RBP7.95□□□□□ -1.14
RNU6-352P-201ENST00000516908 RGL2O15211 777 aa7.93□□□□□ -1.14
RNU6-352P-201ENST00000516908 CREBZFQ9NS37 354 aa7.93□□□□□ -1.14
RNU6-352P-201ENST00000516908 CIZ1Q9ULV3 898 aaPredicted RBP7.93□□□□□ -1.14
RNU6-352P-201ENST00000516908 PRR29P0C7W0 189 aa7.92□□□□□ -1.14
RNU6-352P-201ENST00000516908 PLCB2Q00722 1185 aa7.91□□□□□ -1.14
RNU6-352P-201ENST00000516908 PITPNM1O00562 1244 aa7.9□□□□□ -1.14
RNU6-352P-201ENST00000516908 NPM1P06748 294 aaKnown RBP eCLIP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms