RNA–Protein interactions for RNA: ENST00000578633.1

LIVAR-201, liver cell viability associated lncRNA, humanhuman

TSL 3 BASIC

Gene LIVAR, Length 384 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIVAR-201ENST00000578633 AEBP2Q6ZN18 517 aaPredicted RBP14.38□□□□□ -0.11
LIVAR-201ENST00000578633 CHIC1Q5VXU3 224 aa14.3□□□□□ -0.12
LIVAR-201ENST00000578633 PHF23Q9BUL5 403 aaPredicted RBP12.58□□□□□ -0.4
LIVAR-201ENST00000578633 SENP3Q9H4L4 574 aaPredicted RBP12.2□□□□□ -0.46
LIVAR-201ENST00000578633 PLPPR3Q6T4P5 718 aa11.76□□□□□ -0.53
LIVAR-201ENST00000578633 FOXD1Q16676 465 aa11.28□□□□□ -0.6
LIVAR-201ENST00000578633 ADRA2BP18089 450 aa11.09□□□□□ -0.63
LIVAR-201ENST00000578633 PPP6R1Q9UPN7 881 aa11.04□□□□□ -0.64
LIVAR-201ENST00000578633 PIAS4Q8N2W9 510 aaPredicted RBP10.76□□□□□ -0.69
LIVAR-201ENST00000578633 KCNA4P22459 653 aa10.43□□□□□ -0.74
LIVAR-201ENST00000578633 PPP4R3CPQ6ZMV5 832 aa10.4□□□□□ -0.74
LIVAR-201ENST00000578633 MSH5O43196 834 aa10.32□□□□□ -0.76
LIVAR-201ENST00000578633 NCBP3Q53F19 620 aaKnown RBP10.22□□□□□ -0.77
LIVAR-201ENST00000578633 SCAF1Q9H7N4 1312 aaKnown RBP10.17□□□□□ -0.78
LIVAR-201ENST00000578633 EHMT2Q96KQ7 1210 aa10.07□□□□□ -0.8
LIVAR-201ENST00000578633 CNKSR2Q8WXI2 1034 aa10.04□□□□□ -0.8
LIVAR-201ENST00000578633 NPM3O75607 178 aaKnown RBP10.03□□□□□ -0.8
LIVAR-201ENST00000578633 SLC4A1APQ9BWU0 796 aaKnown RBP10.01□□□□□ -0.81
LIVAR-201ENST00000578633 MAPK8IP2Q13387 824 aaPredicted RBP9.99□□□□□ -0.81
LIVAR-201ENST00000578633 RNF216Q9NWF9 866 aaPredicted RBP9.76□□□□□ -0.85
LIVAR-201ENST00000578633 DMRT2Q9Y5R5 561 aa9.75□□□□□ -0.85
LIVAR-201ENST00000578633 CSRNP3Q8WYN3 585 aa9.74□□□□□ -0.85
LIVAR-201ENST00000578633 HOXD11P31277 338 aaPredicted RBP9.62□□□□□ -0.87
LIVAR-201ENST00000578633 ZBTB22O15209 634 aa9.56□□□□□ -0.88
LIVAR-201ENST00000578633 DNAJC5BQ9UF47 199 aa9.55□□□□□ -0.88
LIVAR-201ENST00000578633 FOXD4L1Q9NU39 408 aa9.53□□□□□ -0.88
LIVAR-201ENST00000578633 DCAF8L1A6NGE4 600 aa9.48□□□□□ -0.89
LIVAR-201ENST00000578633 SLC4A2P04920 1241 aa9.38□□□□□ -0.91
LIVAR-201ENST00000578633 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.29□□□□□ -0.92
LIVAR-201ENST00000578633 MYCNP04198 464 aaPredicted RBP9.28□□□□□ -0.92
LIVAR-201ENST00000578633 ATXN8OSP0DMR3 200 aa9.13□□□□□ -0.95
LIVAR-201ENST00000578633 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.1□□□□□ -0.95
LIVAR-201ENST00000578633 HNRNPUL2Q1KMD3 747 aaKnown RBP9.1□□□□□ -0.95
LIVAR-201ENST00000578633 U3KPZ7 1027 aaPredicted RBP9.09□□□□□ -0.95
LIVAR-201ENST00000578633 SAMD1Q6SPF0 538 aaPredicted RBP9.07□□□□□ -0.96
LIVAR-201ENST00000578633 ATF5Q9Y2D1 282 aaPredicted RBP9□□□□□ -0.97
LIVAR-201ENST00000578633 APLP2Q06481 763 aa8.96□□□□□ -0.98
LIVAR-201ENST00000578633 POTEDQ86YR6 584 aa8.96□□□□□ -0.98
LIVAR-201ENST00000578633 FKBP8Q14318 412 aa8.86□□□□□ -0.99
LIVAR-201ENST00000578633 ZNF219Q9P2Y4 722 aaPredicted RBP8.85□□□□□ -0.99
LIVAR-201ENST00000578633 TRHP20396 242 aaPredicted RBP8.84□□□□□ -0.99
LIVAR-201ENST00000578633 RNF39Q9H2S5 420 aa8.83□□□□□ -1
LIVAR-201ENST00000578633 CAPN15O75808 1086 aa8.81□□□□□ -1
LIVAR-201ENST00000578633 SPINK5Q9NQ38 1064 aaPredicted RBP8.79□□□□□ -1
LIVAR-201ENST00000578633 C1QBPQ07021 282 aaKnown RBP8.76□□□□□ -1.01
LIVAR-201ENST00000578633 POLA2Q14181 598 aa8.7□□□□□ -1.02
LIVAR-201ENST00000578633 FBLN2P98095 1184 aa8.67□□□□□ -1.02
LIVAR-201ENST00000578633 ABCB7O75027 752 aa8.66□□□□□ -1.02
LIVAR-201ENST00000578633 MKRN4PQ13434 485 aaPredicted RBP8.59□□□□□ -1.03
LIVAR-201ENST00000578633 SPDYE4A6NLX3 237 aa8.58□□□□□ -1.04
LIVAR-201ENST00000578633 ZBTB12Q9Y330 459 aaPredicted RBP8.55□□□□□ -1.04
LIVAR-201ENST00000578633 CACNB1Q02641 598 aaPredicted RBP8.53□□□□□ -1.04
LIVAR-201ENST00000578633 DSG3P32926 999 aa8.51□□□□□ -1.05
LIVAR-201ENST00000578633 AMER1Q5JTC6 1135 aaPredicted RBP8.48□□□□□ -1.05
LIVAR-201ENST00000578633 RTN4Q9NQC3 1192 aaKnown RBP8.46□□□□□ -1.06
LIVAR-201ENST00000578633 FBXO3Q9UK99 471 aa8.46□□□□□ -1.06
LIVAR-201ENST00000578633 OSCARQ8IYS5 282 aa8.39□□□□□ -1.07
LIVAR-201ENST00000578633 ZNF692Q9BU19 519 aaPredicted RBP8.39□□□□□ -1.07
LIVAR-201ENST00000578633 PROM2Q8N271 834 aa8.35□□□□□ -1.07
LIVAR-201ENST00000578633 SPDYE2BA6NHP3 402 aa8.33□□□□□ -1.08
LIVAR-201ENST00000578633 SPDYE6P0CI01 402 aa8.33□□□□□ -1.08
LIVAR-201ENST00000578633 SPDYE2Q495Y8 402 aa8.33□□□□□ -1.08
LIVAR-201ENST00000578633 SLC24A1O60721 1099 aa8.31□□□□□ -1.08
LIVAR-201ENST00000578633 VASPP50552 380 aaPredicted RBP8.31□□□□□ -1.08
LIVAR-201ENST00000578633 PABPN1Q86U42 306 aaKnown RBP eCLIP8.28□□□□□ -1.08
LIVAR-201ENST00000578633 SSUH2Q9Y2M2 353 aa8.25□□□□□ -1.09
LIVAR-201ENST00000578633 KLHL34Q8N239 644 aa8.21□□□□□ -1.1
LIVAR-201ENST00000578633 IFNLR1Q8IU57 520 aaPredicted RBP8.2□□□□□ -1.1
LIVAR-201ENST00000578633 STAG3Q9UJ98 1225 aa8.2□□□□□ -1.1
LIVAR-201ENST00000578633 PLCD3Q8N3E9 789 aa8.19□□□□□ -1.1
LIVAR-201ENST00000578633 MIER1Q8N108 512 aa8.16□□□□□ -1.1
LIVAR-201ENST00000578633 RBM42Q9BTD8 480 aaKnown RBP8.15□□□□□ -1.1
LIVAR-201ENST00000578633 PLEKHG5O94827 1062 aa8.13□□□□□ -1.11
LIVAR-201ENST00000578633 DCAF8L2P0C7V8 631 aa8.12□□□□□ -1.11
LIVAR-201ENST00000578633 SPOCK2Q92563 424 aa8.1□□□□□ -1.11
LIVAR-201ENST00000578633 CLEC11AQ9Y240 323 aa8.08□□□□□ -1.12
LIVAR-201ENST00000578633 AKT1S1Q96B36 256 aa8.07□□□□□ -1.12
LIVAR-201ENST00000578633 SPDYE1Q8NFV5 336 aaPredicted RBP8.06□□□□□ -1.12
LIVAR-201ENST00000578633 ZBTB47Q9UFB7 747 aaPredicted RBP8.04□□□□□ -1.12
LIVAR-201ENST00000578633 PKD2Q13563 968 aa8.01□□□□□ -1.13
LIVAR-201ENST00000578633 PRR29P0C7W0 189 aa8□□□□□ -1.13
LIVAR-201ENST00000578633 REM2Q8IYK8 340 aaPredicted RBP8□□□□□ -1.13
LIVAR-201ENST00000578633 CIZ1Q9ULV3 898 aaPredicted RBP8□□□□□ -1.13
LIVAR-201ENST00000578633 ECM2O94769 699 aaPredicted RBP7.99□□□□□ -1.13
LIVAR-201ENST00000578633 PITPNM1O00562 1244 aa7.91□□□□□ -1.14
LIVAR-201ENST00000578633 DCAF8Q5TAQ9 597 aa7.89□□□□□ -1.15
LIVAR-201ENST00000578633 CREBZFQ9NS37 354 aa7.89□□□□□ -1.15
LIVAR-201ENST00000578633 RGL2O15211 777 aa7.87□□□□□ -1.15
LIVAR-201ENST00000578633 GSE1Q14687 1217 aa7.87□□□□□ -1.15
LIVAR-201ENST00000578633 NPM1P06748 294 aaKnown RBP eCLIP7.83□□□□□ -1.16
LIVAR-201ENST00000578633 NUBP1P53384 320 aa7.83□□□□□ -1.16
LIVAR-201ENST00000578633 PLCB2Q00722 1185 aa7.83□□□□□ -1.16
LIVAR-201ENST00000578633 TRIM41Q8WV44 630 aa7.83□□□□□ -1.16
LIVAR-201ENST00000578633 FAM212AQ96EL1 285 aa7.83□□□□□ -1.16
LIVAR-201ENST00000578633 CHADLQ6NUI6 762 aa7.82□□□□□ -1.16
LIVAR-201ENST00000578633 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.82□□□□□ -1.16
LIVAR-201ENST00000578633 HAP1P54257 671 aaPredicted RBP7.81□□□□□ -1.16
LIVAR-201ENST00000578633 CHGAP10645 457 aaKnown RBP7.79□□□□□ -1.16
LIVAR-201ENST00000578633 MNX1P50219 401 aaPredicted RBP7.79□□□□□ -1.16
LIVAR-201ENST00000578633 RASEFQ8IZ41 740 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms