Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGA12O60330 MTCO1P9-201ENST00000505577 1534 ntBASIC4.67□□□□□ -1.66
PCDHGA12O60330 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA12O60330 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA12O60330 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA12O60330 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 GSTA9P-201ENST00000406231 611 ntBASIC4.67□□□□□ -1.66
PCDHGA12O60330 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 CCDC58P2-201ENST00000417131 366 ntBASIC4.67□□□□□ -1.66
PCDHGA12O60330 RPL17P36-201ENST00000420302 549 ntBASIC4.67□□□□□ -1.66
PCDHGA12O60330 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 RPEP3-201ENST00000425462 676 ntBASIC4.67□□□□□ -1.66
PCDHGA12O60330 AL589872.1-201ENST00000426602 288 ntBASIC4.67□□□□□ -1.66
PCDHGA12O60330 MTND4LP10-201ENST00000435146 291 ntBASIC4.67□□□□□ -1.66
PCDHGA12O60330 RPL35AP22-201ENST00000436855 335 ntBASIC4.67□□□□□ -1.66
PCDHGA12O60330 HMGB3P9-201ENST00000441799 583 ntBASIC4.67□□□□□ -1.66
PCDHGA12O60330 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 PSPHP1-201ENST00000450062 261 ntBASIC4.67□□□□□ -1.66
PCDHGA12O60330 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 MTCO2P29-201ENST00000465212 189 ntBASIC4.67□□□□□ -1.66
PCDHGA12O60330 AC004924.1-201ENST00000480160 781 ntBASIC4.67□□□□□ -1.66
PCDHGA12O60330 AC055855.1-201ENST00000489563 579 ntBASIC4.67□□□□□ -1.66
PCDHGA12O60330 AF213884.2-201ENST00000510417 903 ntBASIC4.67□□□□□ -1.66
PCDHGA12O60330 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 RN7SKP244-201ENST00000516513 307 ntBASIC4.67□□□□□ -1.66
PCDHGA12O60330 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA12O60330 AC005868.1-201ENST00000536421 331 ntBASIC4.67□□□□□ -1.66
PCDHGA12O60330 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 AC006254.3-201ENST00000603353 884 ntBASIC4.67□□□□□ -1.66
PCDHGA12O60330 RBM11P1-201ENST00000604951 799 ntBASIC4.67□□□□□ -1.66
PCDHGA12O60330 AC098614.4-201ENST00000607601 462 ntBASIC4.67□□□□□ -1.66
PCDHGA12O60330 AL022401.1-201ENST00000619498 108 ntBASIC4.67□□□□□ -1.66
PCDHGA12O60330 AC068724.3-201ENST00000625906 87 ntBASIC4.67□□□□□ -1.66
PCDHGA12O60330 OR52H1-202ENST00000641796 1061 ntBASIC4.67□□□□□ -1.66
PCDHGA12O60330 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA12O60330 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA12O60330 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.67□□□□□ -1.66
PCDHGA12O60330 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
PCDHGA12O60330 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA12O60330 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA12O60330 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA12O60330 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA12O60330 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA12O60330 ZFRP1-201ENST00000457579 2970 ntBASIC4.66□□□□□ -1.66
PCDHGA12O60330 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA12O60330 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDHGA12O60330 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PCDHGA12O60330 RNU6-1078P-201ENST00000364522 103 ntBASIC4.66□□□□□ -1.66
PCDHGA12O60330 RN7SKP226-201ENST00000364912 300 ntBASIC4.66□□□□□ -1.66
PCDHGA12O60330 MIR124-3-201ENST00000384866 87 ntBASIC4.66□□□□□ -1.66
PCDHGA12O60330 RN7SKP267-201ENST00000410381 285 ntBASIC4.66□□□□□ -1.66
PCDHGA12O60330 RNU2-62P-201ENST00000410868 191 ntBASIC4.66□□□□□ -1.66
PCDHGA12O60330 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHGA12O60330 RPS12P23-201ENST00000419579 400 ntBASIC4.66□□□□□ -1.66
PCDHGA12O60330 AL137014.1-201ENST00000420490 1226 ntBASIC4.66□□□□□ -1.66
PCDHGA12O60330 AL645608.4-201ENST00000423619 154 ntBASIC4.66□□□□□ -1.66
PCDHGA12O60330 MTCYBP5-201ENST00000423752 1135 ntBASIC4.66□□□□□ -1.66
PCDHGA12O60330 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHGA12O60330 ISCA1P6-201ENST00000427740 390 ntBASIC4.66□□□□□ -1.66
PCDHGA12O60330 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHGA12O60330 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHGA12O60330 AC093156.1-201ENST00000440382 670 ntBASIC4.66□□□□□ -1.66
PCDHGA12O60330 NANOGNBP1-201ENST00000448444 480 ntBASIC4.66□□□□□ -1.66
PCDHGA12O60330 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHGA12O60330 AC108059.3-201ENST00000456388 214 ntBASIC4.66□□□□□ -1.66
PCDHGA12O60330 AL445433.1-201ENST00000457507 257 ntBASIC4.66□□□□□ -1.66
PCDHGA12O60330 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDHGA12O60330 RN7SL517P-201ENST00000462240 305 ntBASIC4.66□□□□□ -1.66
PCDHGA12O60330 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA12O60330 RPL9P6-201ENST00000492764 598 ntBASIC4.66□□□□□ -1.66
PCDHGA12O60330 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHGA12O60330 AC091868.1-201ENST00000508746 304 ntBASIC4.66□□□□□ -1.66
PCDHGA12O60330 RN7SKP46-201ENST00000515942 234 ntBASIC4.66□□□□□ -1.66
PCDHGA12O60330 RNU6-1178P-201ENST00000516674 107 ntBASIC4.66□□□□□ -1.66
PCDHGA12O60330 Vault.3-201ENST00000516676 95 ntBASIC4.66□□□□□ -1.66
PCDHGA12O60330 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms