RNA–Protein interactions for RNA: ENST00000414127.1

AC003985.1-201, humanhuman

TSL 3 BASIC

Gene AC003985.1, Length 362 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003985.1-201ENST00000414127 AEBP2Q6ZN18 517 aaPredicted RBP23.35■■□□□ 1.33
AC003985.1-201ENST00000414127 CHIC1Q5VXU3 224 aa22.39■■□□□ 1.17
AC003985.1-201ENST00000414127 PHF23Q9BUL5 403 aaPredicted RBP19.73■□□□□ 0.75
AC003985.1-201ENST00000414127 SENP3Q9H4L4 574 aaPredicted RBP19.73■□□□□ 0.75
AC003985.1-201ENST00000414127 FOXD1Q16676 465 aa18.44■□□□□ 0.54
AC003985.1-201ENST00000414127 PLPPR3Q6T4P5 718 aa17.97■□□□□ 0.47
AC003985.1-201ENST00000414127 PPP6R1Q9UPN7 881 aa17.53■□□□□ 0.4
AC003985.1-201ENST00000414127 ADRA2BP18089 450 aa17.46■□□□□ 0.39
AC003985.1-201ENST00000414127 PIAS4Q8N2W9 510 aaPredicted RBP17.25■□□□□ 0.35
AC003985.1-201ENST00000414127 MSH5O43196 834 aa17.03■□□□□ 0.32
AC003985.1-201ENST00000414127 POTEDQ86YR6 584 aa16.18■□□□□ 0.18
AC003985.1-201ENST00000414127 MAPK8IP2Q13387 824 aaPredicted RBP15.96■□□□□ 0.15
AC003985.1-201ENST00000414127 PPP4R3CPQ6ZMV5 832 aa15.83■□□□□ 0.12
AC003985.1-201ENST00000414127 SCAF1Q9H7N4 1312 aaKnown RBP15.81■□□□□ 0.12
AC003985.1-201ENST00000414127 DMRT2Q9Y5R5 561 aa15.74■□□□□ 0.11
AC003985.1-201ENST00000414127 CNKSR2Q8WXI2 1034 aa15.43■□□□□ 0.06
AC003985.1-201ENST00000414127 HOXD11P31277 338 aaPredicted RBP15.29■□□□□ 0.04
AC003985.1-201ENST00000414127 NCBP3Q53F19 620 aaKnown RBP15.23■□□□□ 0.03
AC003985.1-201ENST00000414127 RNF216Q9NWF9 866 aaPredicted RBP15.22■□□□□ 0.03
AC003985.1-201ENST00000414127 KCNA4P22459 653 aa15.14■□□□□ 0.01
AC003985.1-201ENST00000414127 NPM3O75607 178 aaKnown RBP15.13■□□□□ 0.01
AC003985.1-201ENST00000414127 DCAF8L1A6NGE4 600 aa15.02■□□□□ -0
AC003985.1-201ENST00000414127 DNAJC5BQ9UF47 199 aa14.71□□□□□ -0.05
AC003985.1-201ENST00000414127 RNF39Q9H2S5 420 aa14.63□□□□□ -0.07
AC003985.1-201ENST00000414127 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.5□□□□□ -0.09
AC003985.1-201ENST00000414127 CACNB1Q02641 598 aaPredicted RBP14.43□□□□□ -0.1
AC003985.1-201ENST00000414127 SLC4A2P04920 1241 aa14.41□□□□□ -0.1
AC003985.1-201ENST00000414127 C1QBPQ07021 282 aaKnown RBP14.38□□□□□ -0.11
AC003985.1-201ENST00000414127 U3KPZ7 1027 aaPredicted RBP14.32□□□□□ -0.12
AC003985.1-201ENST00000414127 SLC4A1APQ9BWU0 796 aaKnown RBP14.29□□□□□ -0.12
AC003985.1-201ENST00000414127 SPINK5Q9NQ38 1064 aaPredicted RBP14.03□□□□□ -0.16
AC003985.1-201ENST00000414127 ZBTB22O15209 634 aa13.98□□□□□ -0.17
AC003985.1-201ENST00000414127 FOXD4L1Q9NU39 408 aa13.96□□□□□ -0.17
AC003985.1-201ENST00000414127 MYCNP04198 464 aaPredicted RBP13.92□□□□□ -0.18
AC003985.1-201ENST00000414127 CAPN15O75808 1086 aa13.9□□□□□ -0.18
AC003985.1-201ENST00000414127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.88□□□□□ -0.19
AC003985.1-201ENST00000414127 HNRNPUL2Q1KMD3 747 aaKnown RBP13.88□□□□□ -0.19
AC003985.1-201ENST00000414127 SAMD1Q6SPF0 538 aaPredicted RBP13.85□□□□□ -0.19
AC003985.1-201ENST00000414127 DSG3P32926 999 aa13.81□□□□□ -0.2
AC003985.1-201ENST00000414127 TRHP20396 242 aaPredicted RBP13.77□□□□□ -0.21
AC003985.1-201ENST00000414127 APLP2Q06481 763 aa13.77□□□□□ -0.21
AC003985.1-201ENST00000414127 ZNF219Q9P2Y4 722 aaPredicted RBP13.72□□□□□ -0.21
AC003985.1-201ENST00000414127 ATF5Q9Y2D1 282 aaPredicted RBP13.7□□□□□ -0.22
AC003985.1-201ENST00000414127 ABCB7O75027 752 aa13.66□□□□□ -0.22
AC003985.1-201ENST00000414127 CSRNP3Q8WYN3 585 aa13.57□□□□□ -0.24
AC003985.1-201ENST00000414127 EHMT2Q96KQ7 1210 aa13.52□□□□□ -0.25
AC003985.1-201ENST00000414127 POLA2Q14181 598 aa13.49□□□□□ -0.25
AC003985.1-201ENST00000414127 ATXN8OSP0DMR3 200 aa13.47□□□□□ -0.25
AC003985.1-201ENST00000414127 ZBTB12Q9Y330 459 aaPredicted RBP13.15□□□□□ -0.3
AC003985.1-201ENST00000414127 MKRN4PQ13434 485 aaPredicted RBP13.07□□□□□ -0.32
AC003985.1-201ENST00000414127 OSCARQ8IYS5 282 aa13.07□□□□□ -0.32
AC003985.1-201ENST00000414127 RBM42Q9BTD8 480 aaKnown RBP13.06□□□□□ -0.32
AC003985.1-201ENST00000414127 FBLN2P98095 1184 aa12.98□□□□□ -0.33
AC003985.1-201ENST00000414127 AKT1S1Q96B36 256 aa12.87□□□□□ -0.35
AC003985.1-201ENST00000414127 SPDYE2BA6NHP3 402 aa12.82□□□□□ -0.36
AC003985.1-201ENST00000414127 SPDYE6P0CI01 402 aa12.82□□□□□ -0.36
AC003985.1-201ENST00000414127 SPDYE2Q495Y8 402 aa12.82□□□□□ -0.36
AC003985.1-201ENST00000414127 REM2Q8IYK8 340 aaPredicted RBP12.79□□□□□ -0.36
AC003985.1-201ENST00000414127 SSUH2Q9Y2M2 353 aa12.74□□□□□ -0.37
AC003985.1-201ENST00000414127 CHRDL2Q6WN34 429 aa12.73□□□□□ -0.37
AC003985.1-201ENST00000414127 ZNF692Q9BU19 519 aaPredicted RBP12.72□□□□□ -0.37
AC003985.1-201ENST00000414127 POTEHQ6S545 545 aa12.71□□□□□ -0.37
AC003985.1-201ENST00000414127 PITPNM1O00562 1244 aa12.67□□□□□ -0.38
AC003985.1-201ENST00000414127 PABPN1Q86U42 306 aaKnown RBP eCLIP12.57□□□□□ -0.4
AC003985.1-201ENST00000414127 SPDYE4A6NLX3 237 aa12.53□□□□□ -0.4
AC003985.1-201ENST00000414127 PIP4P2Q8N4L2 257 aa12.52□□□□□ -0.41
AC003985.1-201ENST00000414127 SPDYE1Q8NFV5 336 aaPredicted RBP12.51□□□□□ -0.41
AC003985.1-201ENST00000414127 FXR2P51116 673 aaKnown RBP eCLIP12.49□□□□□ -0.41
AC003985.1-201ENST00000414127 CLEC11AQ9Y240 323 aa12.48□□□□□ -0.41
AC003985.1-201ENST00000414127 PROM2Q8N271 834 aa12.33□□□□□ -0.44
AC003985.1-201ENST00000414127 PRR29P0C7W0 189 aa12.31□□□□□ -0.44
AC003985.1-201ENST00000414127 PRKAR2AP13861 404 aaKnown RBP12.31□□□□□ -0.44
AC003985.1-201ENST00000414127 CHADLQ6NUI6 762 aa12.28□□□□□ -0.44
AC003985.1-201ENST00000414127 FKBP8Q14318 412 aa12.23□□□□□ -0.45
AC003985.1-201ENST00000414127 STAG3Q9UJ98 1225 aa12.2□□□□□ -0.46
AC003985.1-201ENST00000414127 CREBZFQ9NS37 354 aa12.16□□□□□ -0.46
AC003985.1-201ENST00000414127 HAX1O00165 279 aa12.15□□□□□ -0.46
AC003985.1-201ENST00000414127 EVX2Q03828 476 aa12.15□□□□□ -0.46
AC003985.1-201ENST00000414127 FARP1Q9Y4F1 1045 aaPredicted RBP12.1□□□□□ -0.47
AC003985.1-201ENST00000414127 C19orf67A6NJJ6 358 aa12.07□□□□□ -0.48
AC003985.1-201ENST00000414127 SP7Q8TDD2 431 aaPredicted RBP12.06□□□□□ -0.48
AC003985.1-201ENST00000414127 MNX1P50219 401 aaPredicted RBP12.03□□□□□ -0.48
AC003985.1-201ENST00000414127 CD44P16070 742 aaKnown RBP11.94□□□□□ -0.5
AC003985.1-201ENST00000414127 MIER1Q8N108 512 aa11.88□□□□□ -0.51
AC003985.1-201ENST00000414127 NPM1P06748 294 aaKnown RBP eCLIP11.83□□□□□ -0.52
AC003985.1-201ENST00000414127 GABBR2O75899 941 aa11.81□□□□□ -0.52
AC003985.1-201ENST00000414127 PLCD3Q8N3E9 789 aa11.81□□□□□ -0.52
AC003985.1-201ENST00000414127 ZRANB1Q9UGI0 708 aa11.81□□□□□ -0.52
AC003985.1-201ENST00000414127 FBXO3Q9UK99 471 aa11.81□□□□□ -0.52
AC003985.1-201ENST00000414127 ZNF579Q8NAF0 562 aaKnown RBP11.78□□□□□ -0.52
AC003985.1-201ENST00000414127 PLEKHG5O94827 1062 aa11.75□□□□□ -0.53
AC003985.1-201ENST00000414127 VASPP50552 380 aaPredicted RBP11.74□□□□□ -0.53
AC003985.1-201ENST00000414127 RASEFQ8IZ41 740 aa11.73□□□□□ -0.53
AC003985.1-201ENST00000414127 PHF12Q96QT6 1004 aa11.72□□□□□ -0.53
AC003985.1-201ENST00000414127 PAK3O75914 559 aaPredicted RBP11.7□□□□□ -0.54
AC003985.1-201ENST00000414127 TSPYL2Q9H2G4 693 aaPredicted RBP11.7□□□□□ -0.54
AC003985.1-201ENST00000414127 NUBP1P53384 320 aa11.69□□□□□ -0.54
AC003985.1-201ENST00000414127 CCDC61Q9Y6R9 512 aa11.66□□□□□ -0.54
AC003985.1-201ENST00000414127 GALR2O43603 387 aaPredicted RBP11.65□□□□□ -0.54
AC003985.1-201ENST00000414127 ZBTB47Q9UFB7 747 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms