RNA–Protein interactions for RNA: ENST00000515942.1

RN7SKP46-201, Transcript of RNA, 7SK small nuclear pseudogene 46, humanhuman

BASIC

Gene RN7SKP46, Length 234 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP46-201ENST00000515942 NISCHQ9Y2I1 1504 aa9□□□□□ -0.97
RN7SKP46-201ENST00000515942 PELP1Q8IZL8 1130 aaKnown RBP8.01□□□□□ -1.13
RN7SKP46-201ENST00000515942 HRCP23327 699 aa7.88□□□□□ -1.15
RN7SKP46-201ENST00000515942 MYT1Q01538 1121 aa7.88□□□□□ -1.15
RN7SKP46-201ENST00000515942 ZEB1P37275 1124 aaPredicted RBP7.81□□□□□ -1.16
RN7SKP46-201ENST00000515942 SUPT5HO00267 1087 aaKnown RBP7.7□□□□□ -1.18
RN7SKP46-201ENST00000515942 DCAF1Q9Y4B6 1507 aa7.69□□□□□ -1.18
RN7SKP46-201ENST00000515942 CCDC180Q9P1Z9 1646 aa7.68□□□□□ -1.18
RN7SKP46-201ENST00000515942 ZCCHC6Q5VYS8 1495 aaKnown RBP7.65□□□□□ -1.18
RN7SKP46-201ENST00000515942 TRIM26Q12899 539 aaPredicted RBP7.64□□□□□ -1.19
RN7SKP46-201ENST00000515942 CHIC1Q5VXU3 224 aa7.63□□□□□ -1.19
RN7SKP46-201ENST00000515942 PCGF6Q9BYE7 350 aa7.63□□□□□ -1.19
RN7SKP46-201ENST00000515942 SHROOM4Q9ULL8 1493 aa7.61□□□□□ -1.19
RN7SKP46-201ENST00000515942 CENPBP07199 599 aaPredicted RBP7.48□□□□□ -1.21
RN7SKP46-201ENST00000515942 MYO15BQ96JP2 1530 aa7.42□□□□□ -1.22
RN7SKP46-201ENST00000515942 TTBK1Q5TCY1 1321 aaPredicted RBP7.4□□□□□ -1.22
RN7SKP46-201ENST00000515942 PPARGC1BQ86YN6 1023 aaKnown RBP7.36□□□□□ -1.23
RN7SKP46-201ENST00000515942 DCAF8L2P0C7V8 631 aa7.34□□□□□ -1.23
RN7SKP46-201ENST00000515942 CLSPNQ9HAW4 1339 aa7.33□□□□□ -1.24
RN7SKP46-201ENST00000515942 TRIM41Q8WV44 630 aa7.32□□□□□ -1.24
RN7SKP46-201ENST00000515942 ACIN1Q9UKV3 1341 aaKnown RBP7.3□□□□□ -1.24
RN7SKP46-201ENST00000515942 LOC105371045A0A1W2PR82 267 aa7.27□□□□□ -1.25
RN7SKP46-201ENST00000515942 ABCC9O60706 1549 aa7.26□□□□□ -1.25
RN7SKP46-201ENST00000515942 SCAF1Q9H7N4 1312 aaKnown RBP7.26□□□□□ -1.25
RN7SKP46-201ENST00000515942 CCER1Q8TC90 406 aaPredicted RBP7.25□□□□□ -1.25
RN7SKP46-201ENST00000515942 RB1CC1Q8TDY2 1594 aa7.24□□□□□ -1.25
RN7SKP46-201ENST00000515942 DIEXFQ68CQ4 756 aaKnown RBP7.22□□□□□ -1.25
RN7SKP46-201ENST00000515942 GTF3C3Q9Y5Q9 886 aa7.16□□□□□ -1.26
RN7SKP46-201ENST00000515942 EEA1Q15075 1411 aa7.15□□□□□ -1.27
RN7SKP46-201ENST00000515942 RSF1Q96T23 1441 aaPredicted RBP7.15□□□□□ -1.27
RN7SKP46-201ENST00000515942 ZNF316A6NFI3 1004 aaPredicted RBP7.14□□□□□ -1.27
RN7SKP46-201ENST00000515942 WRNQ14191 1432 aaPredicted RBP eCLIP7.12□□□□□ -1.27
RN7SKP46-201ENST00000515942 NEUROD1Q13562 356 aa7.1□□□□□ -1.27
RN7SKP46-201ENST00000515942 NACADO15069 1562 aa7.07□□□□□ -1.28
RN7SKP46-201ENST00000515942 APLP2Q06481 763 aa7.06□□□□□ -1.28
RN7SKP46-201ENST00000515942 FAM9AQ8IZU1 332 aaPredicted RBP7.05□□□□□ -1.28
RN7SKP46-201ENST00000515942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.04□□□□□ -1.28
RN7SKP46-201ENST00000515942 TNIKQ9UKE5 1360 aa7.04□□□□□ -1.28
RN7SKP46-201ENST00000515942 MYT1LQ9UL68 1186 aa7.01□□□□□ -1.29
RN7SKP46-201ENST00000515942 SCRIBQ14160 1630 aa7□□□□□ -1.29
RN7SKP46-201ENST00000515942 BAZ1AQ9NRL2 1556 aaPredicted RBP6.99□□□□□ -1.29
RN7SKP46-201ENST00000515942 CEP162Q5TB80 1403 aa6.96□□□□□ -1.3
RN7SKP46-201ENST00000515942 GOLGA3Q08378 1498 aa6.96□□□□□ -1.3
RN7SKP46-201ENST00000515942 CSRNP3Q8WYN3 585 aa6.95□□□□□ -1.3
RN7SKP46-201ENST00000515942 UBTFP17480 764 aaKnown RBP6.94□□□□□ -1.3
RN7SKP46-201ENST00000515942 NEFLP07196 543 aa6.93□□□□□ -1.3
RN7SKP46-201ENST00000515942 ANP32EQ9BTT0 268 aa6.93□□□□□ -1.3
RN7SKP46-201ENST00000515942 CEP164Q9UPV0 1460 aa6.92□□□□□ -1.3
RN7SKP46-201ENST00000515942 YTHDC1Q96MU7 727 aaKnown RBP6.91□□□□□ -1.3
RN7SKP46-201ENST00000515942 BAZ1BQ9UIG0 1483 aaKnown RBP6.91□□□□□ -1.3
RN7SKP46-201ENST00000515942 TOP2AP11388 1531 aaKnown RBP6.91□□□□□ -1.3
RN7SKP46-201ENST00000515942 MROH2BQ7Z745 1585 aa6.88□□□□□ -1.31
RN7SKP46-201ENST00000515942 MIER1Q8N108 512 aa6.88□□□□□ -1.31
RN7SKP46-201ENST00000515942 TIMELESSQ9UNS1 1208 aa6.88□□□□□ -1.31
RN7SKP46-201ENST00000515942 KIF21BO75037 1637 aa6.87□□□□□ -1.31
RN7SKP46-201ENST00000515942 VPS8Q8N3P4 1428 aa6.85□□□□□ -1.31
RN7SKP46-201ENST00000515942 WIZO95785 1651 aa6.85□□□□□ -1.31
RN7SKP46-201ENST00000515942 ERICH6Q7L0X2 663 aa6.85□□□□□ -1.31
RN7SKP46-201ENST00000515942 EIF4G1Q04637 1599 aaKnown RBP6.84□□□□□ -1.31
RN7SKP46-201ENST00000515942 ERICH6BQ5W0A0 696 aa6.84□□□□□ -1.31
RN7SKP46-201ENST00000515942 EHMT2Q96KQ7 1210 aa6.84□□□□□ -1.31
RN7SKP46-201ENST00000515942 SUPT16HQ9Y5B9 1047 aaKnown RBP6.84□□□□□ -1.31
RN7SKP46-201ENST00000515942 CLIP1P30622 1438 aa6.83□□□□□ -1.32
RN7SKP46-201ENST00000515942 CECR2Q9BXF3 1484 aa6.81□□□□□ -1.32
RN7SKP46-201ENST00000515942 HNRNPUL2Q1KMD3 747 aaKnown RBP6.8□□□□□ -1.32
RN7SKP46-201ENST00000515942 SMARCA4P51532 1647 aa6.79□□□□□ -1.32
RN7SKP46-201ENST00000515942 CCDC88BA6NC98 1476 aa6.79□□□□□ -1.32
RN7SKP46-201ENST00000515942 CCER2I3L3R5 266 aa6.79□□□□□ -1.32
RN7SKP46-201ENST00000515942 SMARCA2P51531 1590 aa6.78□□□□□ -1.32
RN7SKP46-201ENST00000515942 CDK11AQ9UQ88 783 aaPredicted RBP6.77□□□□□ -1.33
RN7SKP46-201ENST00000515942 ERICH3Q5RHP9 1530 aa6.76□□□□□ -1.33
RN7SKP46-201ENST00000515942 ANP32CO43423 234 aa6.76□□□□□ -1.33
RN7SKP46-201ENST00000515942 TSHZ2Q9NRE2 1034 aa6.76□□□□□ -1.33
RN7SKP46-201ENST00000515942 BCL11AQ9H165 835 aa6.75□□□□□ -1.33
RN7SKP46-201ENST00000515942 SOGA1O94964 1423 aa6.75□□□□□ -1.33
RN7SKP46-201ENST00000515942 CUX2O14529 1486 aa6.74□□□□□ -1.33
RN7SKP46-201ENST00000515942 ABCC8Q09428 1581 aa6.74□□□□□ -1.33
RN7SKP46-201ENST00000515942 DHX57Q6P158 1386 aaKnown RBP6.73□□□□□ -1.33
RN7SKP46-201ENST00000515942 PEG3Q9GZU2 1588 aa6.73□□□□□ -1.33
RN7SKP46-201ENST00000515942 FANCIQ9NVI1 1328 aa6.73□□□□□ -1.33
RN7SKP46-201ENST00000515942 RRBP1Q9P2E9 1410 aaKnown RBP6.72□□□□□ -1.33
RN7SKP46-201ENST00000515942 MAP3K1Q13233 1512 aa6.71□□□□□ -1.33
RN7SKP46-201ENST00000515942 FKBP8Q14318 412 aa6.7□□□□□ -1.34
RN7SKP46-201ENST00000515942 CCNB3Q8WWL7 1395 aa6.69□□□□□ -1.34
RN7SKP46-201ENST00000515942 RBM19Q9Y4C8 960 aaKnown RBP6.68□□□□□ -1.34
RN7SKP46-201ENST00000515942 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.66□□□□□ -1.34
RN7SKP46-201ENST00000515942 FHAD1B1AJZ9 1412 aa6.66□□□□□ -1.34
RN7SKP46-201ENST00000515942 KIF27Q86VH2 1401 aa6.66□□□□□ -1.34
RN7SKP46-201ENST00000515942 SETD5Q9C0A6 1442 aa6.66□□□□□ -1.34
RN7SKP46-201ENST00000515942 TOP2BQ02880 1626 aa6.65□□□□□ -1.34
RN7SKP46-201ENST00000515942 RTL5Q5HYW3 569 aaPredicted RBP6.64□□□□□ -1.35
RN7SKP46-201ENST00000515942 SYNJ1O43426 1573 aa6.64□□□□□ -1.35
RN7SKP46-201ENST00000515942 PPP4R2Q9NY27 417 aa6.63□□□□□ -1.35
RN7SKP46-201ENST00000515942 BIVM-ERCC5R4GMW8 1640 aa6.62□□□□□ -1.35
RN7SKP46-201ENST00000515942 PRXQ9BXM0 1461 aa6.62□□□□□ -1.35
RN7SKP46-201ENST00000515942 RAPGEF2Q9Y4G8 1499 aa6.62□□□□□ -1.35
RN7SKP46-201ENST00000515942 RUSC2Q8N2Y8 1516 aa6.61□□□□□ -1.35
RN7SKP46-201ENST00000515942 TONSLQ96HA7 1378 aa6.61□□□□□ -1.35
RN7SKP46-201ENST00000515942 ANP32AP39687 249 aaKnown RBP6.61□□□□□ -1.35
RN7SKP46-201ENST00000515942 RAB3GAP2Q9H2M9 1393 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms