RNA–Protein interactions for RNA: ENST00000516674.1

RNU6-1178P-201, Transcript of RNA, U6 small nuclear 1178, pseudogene, humanhuman

BASIC

Gene RNU6-1178P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1178P-201ENST00000516674 AEBP2Q6ZN18 517 aaPredicted RBP27.98■■■□□ 2.07
RNU6-1178P-201ENST00000516674 CHIC1Q5VXU3 224 aa26.39■■□□□ 1.82
RNU6-1178P-201ENST00000516674 SENP3Q9H4L4 574 aaPredicted RBP23.52■■□□□ 1.36
RNU6-1178P-201ENST00000516674 PHF23Q9BUL5 403 aaPredicted RBP23.38■■□□□ 1.33
RNU6-1178P-201ENST00000516674 FOXD1Q16676 465 aa22.14■■□□□ 1.13
RNU6-1178P-201ENST00000516674 PLPPR3Q6T4P5 718 aa20.96■□□□□ 0.95
RNU6-1178P-201ENST00000516674 PPP6R1Q9UPN7 881 aa20.86■□□□□ 0.93
RNU6-1178P-201ENST00000516674 ADRA2BP18089 450 aa20.73■□□□□ 0.91
RNU6-1178P-201ENST00000516674 PIAS4Q8N2W9 510 aaPredicted RBP20.57■□□□□ 0.88
RNU6-1178P-201ENST00000516674 MSH5O43196 834 aa20.44■□□□□ 0.86
RNU6-1178P-201ENST00000516674 POTEDQ86YR6 584 aa20.15■□□□□ 0.82
RNU6-1178P-201ENST00000516674 MAPK8IP2Q13387 824 aaPredicted RBP19.1■□□□□ 0.65
RNU6-1178P-201ENST00000516674 DMRT2Q9Y5R5 561 aa18.75■□□□□ 0.59
RNU6-1178P-201ENST00000516674 SCAF1Q9H7N4 1312 aaKnown RBP18.56■□□□□ 0.56
RNU6-1178P-201ENST00000516674 PPP4R3CPQ6ZMV5 832 aa18.5■□□□□ 0.55
RNU6-1178P-201ENST00000516674 HOXD11P31277 338 aaPredicted RBP18.07■□□□□ 0.48
RNU6-1178P-201ENST00000516674 CNKSR2Q8WXI2 1034 aa18.03■□□□□ 0.48
RNU6-1178P-201ENST00000516674 DCAF8L1A6NGE4 600 aa17.95■□□□□ 0.46
RNU6-1178P-201ENST00000516674 RNF216Q9NWF9 866 aaPredicted RBP17.88■□□□□ 0.45
RNU6-1178P-201ENST00000516674 CACNB1Q02641 598 aaPredicted RBP17.61■□□□□ 0.41
RNU6-1178P-201ENST00000516674 RNF39Q9H2S5 420 aa17.6■□□□□ 0.41
RNU6-1178P-201ENST00000516674 NPM3O75607 178 aaKnown RBP17.59■□□□□ 0.41
RNU6-1178P-201ENST00000516674 NCBP3Q53F19 620 aaKnown RBP17.56■□□□□ 0.4
RNU6-1178P-201ENST00000516674 KCNA4P22459 653 aa17.35■□□□□ 0.37
RNU6-1178P-201ENST00000516674 DNAJC5BQ9UF47 199 aa17.25■□□□□ 0.35
RNU6-1178P-201ENST00000516674 C1QBPQ07021 282 aaKnown RBP17.21■□□□□ 0.35
RNU6-1178P-201ENST00000516674 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.15■□□□□ 0.34
RNU6-1178P-201ENST00000516674 U3KPZ7 1027 aaPredicted RBP16.94■□□□□ 0.3
RNU6-1178P-201ENST00000516674 SLC4A2P04920 1241 aa16.88■□□□□ 0.29
RNU6-1178P-201ENST00000516674 SPINK5Q9NQ38 1064 aaPredicted RBP16.75■□□□□ 0.27
RNU6-1178P-201ENST00000516674 CAPN15O75808 1086 aa16.54■□□□□ 0.24
RNU6-1178P-201ENST00000516674 DSG3P32926 999 aa16.52■□□□□ 0.24
RNU6-1178P-201ENST00000516674 TRHP20396 242 aaPredicted RBP16.33■□□□□ 0.2
RNU6-1178P-201ENST00000516674 ABCB7O75027 752 aa16.29■□□□□ 0.2
RNU6-1178P-201ENST00000516674 SLC4A1APQ9BWU0 796 aaKnown RBP16.24■□□□□ 0.19
RNU6-1178P-201ENST00000516674 SAMD1Q6SPF0 538 aaPredicted RBP16.12■□□□□ 0.17
RNU6-1178P-201ENST00000516674 ZNF219Q9P2Y4 722 aaPredicted RBP16.12■□□□□ 0.17
RNU6-1178P-201ENST00000516674 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.11■□□□□ 0.17
RNU6-1178P-201ENST00000516674 HNRNPUL2Q1KMD3 747 aaKnown RBP16.11■□□□□ 0.17
RNU6-1178P-201ENST00000516674 MYCNP04198 464 aaPredicted RBP16.1■□□□□ 0.17
RNU6-1178P-201ENST00000516674 ZBTB22O15209 634 aa16.08■□□□□ 0.16
RNU6-1178P-201ENST00000516674 ATF5Q9Y2D1 282 aaPredicted RBP16.06■□□□□ 0.16
RNU6-1178P-201ENST00000516674 APLP2Q06481 763 aa16.03■□□□□ 0.16
RNU6-1178P-201ENST00000516674 FOXD4L1Q9NU39 408 aa16.01■□□□□ 0.15
RNU6-1178P-201ENST00000516674 POLA2Q14181 598 aa15.91■□□□□ 0.14
RNU6-1178P-201ENST00000516674 POTEHQ6S545 545 aa15.71■□□□□ 0.11
RNU6-1178P-201ENST00000516674 RBM42Q9BTD8 480 aaKnown RBP15.49■□□□□ 0.07
RNU6-1178P-201ENST00000516674 OSCARQ8IYS5 282 aa15.45■□□□□ 0.06
RNU6-1178P-201ENST00000516674 ATXN8OSP0DMR3 200 aa15.4■□□□□ 0.06
RNU6-1178P-201ENST00000516674 CHRDL2Q6WN34 429 aa15.34■□□□□ 0.05
RNU6-1178P-201ENST00000516674 ZBTB12Q9Y330 459 aaPredicted RBP15.31■□□□□ 0.04
RNU6-1178P-201ENST00000516674 MKRN4PQ13434 485 aaPredicted RBP15.27■□□□□ 0.04
RNU6-1178P-201ENST00000516674 CSRNP3Q8WYN3 585 aa15.26■□□□□ 0.03
RNU6-1178P-201ENST00000516674 AKT1S1Q96B36 256 aa15.26■□□□□ 0.03
RNU6-1178P-201ENST00000516674 REM2Q8IYK8 340 aaPredicted RBP15.23■□□□□ 0.03
RNU6-1178P-201ENST00000516674 PITPNM1O00562 1244 aa15.11■□□□□ 0.01
RNU6-1178P-201ENST00000516674 PIP4P2Q8N4L2 257 aa15.05■□□□□ -0
RNU6-1178P-201ENST00000516674 EHMT2Q96KQ7 1210 aa15.04■□□□□ -0
RNU6-1178P-201ENST00000516674 FBLN2P98095 1184 aa15.02■□□□□ -0
RNU6-1178P-201ENST00000516674 SPDYE2BA6NHP3 402 aa14.97□□□□□ -0.01
RNU6-1178P-201ENST00000516674 SPDYE6P0CI01 402 aa14.97□□□□□ -0.01
RNU6-1178P-201ENST00000516674 SPDYE2Q495Y8 402 aa14.97□□□□□ -0.01
RNU6-1178P-201ENST00000516674 FXR2P51116 673 aaKnown RBP eCLIP14.93□□□□□ -0.02
RNU6-1178P-201ENST00000516674 SSUH2Q9Y2M2 353 aa14.9□□□□□ -0.02
RNU6-1178P-201ENST00000516674 ZNF692Q9BU19 519 aaPredicted RBP14.86□□□□□ -0.03
RNU6-1178P-201ENST00000516674 EVX2Q03828 476 aa14.79□□□□□ -0.04
RNU6-1178P-201ENST00000516674 CLEC11AQ9Y240 323 aa14.76□□□□□ -0.05
RNU6-1178P-201ENST00000516674 SP7Q8TDD2 431 aaPredicted RBP14.72□□□□□ -0.05
RNU6-1178P-201ENST00000516674 PABPN1Q86U42 306 aaKnown RBP eCLIP14.7□□□□□ -0.06
RNU6-1178P-201ENST00000516674 SPDYE1Q8NFV5 336 aaPredicted RBP14.68□□□□□ -0.06
RNU6-1178P-201ENST00000516674 HAX1O00165 279 aa14.67□□□□□ -0.06
RNU6-1178P-201ENST00000516674 PRKAR2AP13861 404 aaKnown RBP14.66□□□□□ -0.06
RNU6-1178P-201ENST00000516674 CHADLQ6NUI6 762 aa14.63□□□□□ -0.07
RNU6-1178P-201ENST00000516674 C19orf67A6NJJ6 358 aa14.46□□□□□ -0.09
RNU6-1178P-201ENST00000516674 PRR29P0C7W0 189 aa14.46□□□□□ -0.09
RNU6-1178P-201ENST00000516674 SPDYE4A6NLX3 237 aa14.37□□□□□ -0.11
RNU6-1178P-201ENST00000516674 FARP1Q9Y4F1 1045 aaPredicted RBP14.29□□□□□ -0.12
RNU6-1178P-201ENST00000516674 CREBZFQ9NS37 354 aa14.27□□□□□ -0.13
RNU6-1178P-201ENST00000516674 GABBR2O75899 941 aa14.25□□□□□ -0.13
RNU6-1178P-201ENST00000516674 CD44P16070 742 aaKnown RBP14.18□□□□□ -0.14
RNU6-1178P-201ENST00000516674 POTEIP0CG38 1075 aa14.1□□□□□ -0.15
RNU6-1178P-201ENST00000516674 PROM2Q8N271 834 aa14.1□□□□□ -0.15
RNU6-1178P-201ENST00000516674 MNX1P50219 401 aaPredicted RBP14.08□□□□□ -0.16
RNU6-1178P-201ENST00000516674 STAG3Q9UJ98 1225 aa14.07□□□□□ -0.16
RNU6-1178P-201ENST00000516674 ZRANB1Q9UGI0 708 aa13.99□□□□□ -0.17
RNU6-1178P-201ENST00000516674 ZNF579Q8NAF0 562 aaKnown RBP13.94□□□□□ -0.18
RNU6-1178P-201ENST00000516674 PHF12Q96QT6 1004 aa13.92□□□□□ -0.18
RNU6-1178P-201ENST00000516674 GALR2O43603 387 aaPredicted RBP13.91□□□□□ -0.18
RNU6-1178P-201ENST00000516674 LHX8Q68G74 356 aa13.82□□□□□ -0.2
RNU6-1178P-201ENST00000516674 FKBP8Q14318 412 aa13.75□□□□□ -0.21
RNU6-1178P-201ENST00000516674 NPM1P06748 294 aaKnown RBP eCLIP13.74□□□□□ -0.21
RNU6-1178P-201ENST00000516674 PELP1Q8IZL8 1130 aaKnown RBP13.72□□□□□ -0.21
RNU6-1178P-201ENST00000516674 DCBLD2Q96PD2 775 aa13.72□□□□□ -0.21
RNU6-1178P-201ENST00000516674 TSPYL2Q9H2G4 693 aaPredicted RBP13.72□□□□□ -0.21
RNU6-1178P-201ENST00000516674 MS4A3Q96HJ5 214 aa13.69□□□□□ -0.22
RNU6-1178P-201ENST00000516674 CLCN6P51797 869 aa13.68□□□□□ -0.22
RNU6-1178P-201ENST00000516674 POTEB2H3BUK9 544 aa13.67□□□□□ -0.22
RNU6-1178P-201ENST00000516674 RASEFQ8IZ41 740 aa13.67□□□□□ -0.22
RNU6-1178P-201ENST00000516674 MIER1Q8N108 512 aa13.67□□□□□ -0.22
RNU6-1178P-201ENST00000516674 CCDC61Q9Y6R9 512 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms