Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
RNF39Q9H2S5 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC7.97□□□□□ -1.13
RNF39Q9H2S5 SMG1P6-201ENST00000532337 2930 ntBASIC7.97□□□□□ -1.13
RNF39Q9H2S5 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
RNF39Q9H2S5 VPS13D-212ENST00000543766 3838 ntTSL 2 BASIC7.97□□□□□ -1.13
RNF39Q9H2S5 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RNF39Q9H2S5 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RNF39Q9H2S5 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RNF39Q9H2S5 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
RNF39Q9H2S5 MAPK10-281ENST00000641170 3070 ntBASIC7.97□□□□□ -1.13
RNF39Q9H2S5 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC7.96□□□□□ -1.13
RNF39Q9H2S5 AC125603.4-201ENST00000621942 2699 ntBASIC7.96□□□□□ -1.13
RNF39Q9H2S5 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC7.96□□□□□ -1.13
RNF39Q9H2S5 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC7.96□□□□□ -1.13
RNF39Q9H2S5 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC7.96□□□□□ -1.13
RNF39Q9H2S5 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
RNF39Q9H2S5 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
RNF39Q9H2S5 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
RNF39Q9H2S5 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
RNF39Q9H2S5 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
RNF39Q9H2S5 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
RNF39Q9H2S5 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
RNF39Q9H2S5 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
RNF39Q9H2S5 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
RNF39Q9H2S5 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.96□□□□□ -1.14
RNF39Q9H2S5 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
RNF39Q9H2S5 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.96□□□□□ -1.14
RNF39Q9H2S5 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
RNF39Q9H2S5 Y_RNA.213-201ENST00000364178 111 ntBASIC7.96□□□□□ -1.14
RNF39Q9H2S5 SNORA70.8-201ENST00000384231 136 ntBASIC7.96□□□□□ -1.14
RNF39Q9H2S5 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.96□□□□□ -1.14
RNF39Q9H2S5 AC090774.1-201ENST00000435925 246 ntBASIC7.96□□□□□ -1.14
RNF39Q9H2S5 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC7.96□□□□□ -1.14
RNF39Q9H2S5 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
RNF39Q9H2S5 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC7.96□□□□□ -1.14
RNF39Q9H2S5 AL591122.1-201ENST00000487348 492 ntBASIC7.96□□□□□ -1.14
RNF39Q9H2S5 RPL23AP54-201ENST00000495129 419 ntBASIC7.96□□□□□ -1.14
RNF39Q9H2S5 AC097462.1-201ENST00000514125 324 ntBASIC7.96□□□□□ -1.14
RNF39Q9H2S5 RNU6-539P-201ENST00000516665 103 ntBASIC7.96□□□□□ -1.14
RNF39Q9H2S5 RNA5SP471-201ENST00000516971 106 ntBASIC7.96□□□□□ -1.14
RNF39Q9H2S5 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC7.96□□□□□ -1.14
RNF39Q9H2S5 NDUFA3P2-201ENST00000531434 232 ntBASIC7.96□□□□□ -1.14
RNF39Q9H2S5 AC068768.2-201ENST00000602352 343 ntBASIC7.96□□□□□ -1.14
RNF39Q9H2S5 MIR6774-201ENST00000614651 70 ntBASIC7.96□□□□□ -1.14
RNF39Q9H2S5 HOTTIP_4.1-201ENST00000618195 165 ntBASIC7.96□□□□□ -1.14
RNF39Q9H2S5 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
RNF39Q9H2S5 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC7.96□□□□□ -1.14
RNF39Q9H2S5 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
RNF39Q9H2S5 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
RNF39Q9H2S5 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC7.96□□□□□ -1.14
RNF39Q9H2S5 AC009108.3-201ENST00000602739 3515 ntBASIC7.96□□□□□ -1.14
RNF39Q9H2S5 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
RNF39Q9H2S5 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
RNF39Q9H2S5 IST1-208ENST00000535424 4082 ntTSL 5 BASIC7.96□□□□□ -1.14
RNF39Q9H2S5 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RNF39Q9H2S5 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RNF39Q9H2S5 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
RNF39Q9H2S5 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC7.95□□□□□ -1.14
RNF39Q9H2S5 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.95□□□□□ -1.14
RNF39Q9H2S5 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RNF39Q9H2S5 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
RNF39Q9H2S5 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC7.95□□□□□ -1.14
RNF39Q9H2S5 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RNF39Q9H2S5 RN7SKP27-201ENST00000410684 333 ntBASIC7.95□□□□□ -1.14
RNF39Q9H2S5 ATP6V0E1P1-201ENST00000412537 226 ntBASIC7.95□□□□□ -1.14
RNF39Q9H2S5 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC7.95□□□□□ -1.14
RNF39Q9H2S5 AC068287.1-201ENST00000430283 295 ntBASIC7.95□□□□□ -1.14
RNF39Q9H2S5 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC7.95□□□□□ -1.14
RNF39Q9H2S5 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC7.95□□□□□ -1.14
RNF39Q9H2S5 TREML3P-201ENST00000457327 501 ntBASIC7.95□□□□□ -1.14
RNF39Q9H2S5 RN7SL251P-201ENST00000464175 297 ntBASIC7.95□□□□□ -1.14
RNF39Q9H2S5 RN7SL643P-201ENST00000471845 291 ntBASIC7.95□□□□□ -1.14
RNF39Q9H2S5 RPL10P7-201ENST00000495649 625 ntBASIC7.95□□□□□ -1.14
RNF39Q9H2S5 RNU6-927P-201ENST00000516199 100 ntBASIC7.95□□□□□ -1.14
RNF39Q9H2S5 RNU6-113P-201ENST00000516653 101 ntBASIC7.95□□□□□ -1.14
RNF39Q9H2S5 SSU72P6-201ENST00000532644 488 ntBASIC7.95□□□□□ -1.14
RNF39Q9H2S5 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
RNF39Q9H2S5 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC7.95□□□□□ -1.14
RNF39Q9H2S5 MIR8082-201ENST00000612488 81 ntBASIC7.95□□□□□ -1.14
RNF39Q9H2S5 AC127024.6-201ENST00000621598 424 ntBASIC7.95□□□□□ -1.14
RNF39Q9H2S5 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
RNF39Q9H2S5 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
RNF39Q9H2S5 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC7.95□□□□□ -1.14
RNF39Q9H2S5 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RNF39Q9H2S5 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RNF39Q9H2S5 AC245060.6-201ENST00000624350 8420 ntBASIC7.95□□□□□ -1.14
RNF39Q9H2S5 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RNF39Q9H2S5 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
RNF39Q9H2S5 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RNF39Q9H2S5 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RNF39Q9H2S5 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
RNF39Q9H2S5 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RNF39Q9H2S5 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.95□□□□□ -1.14
RNF39Q9H2S5 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
RNF39Q9H2S5 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms