Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC4.48□□□□□ -1.69
KRTAP3-3Q9BYR6 SERPINA1-206ENST00000437397 3340 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KRTAP3-3Q9BYR6 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KRTAP3-3Q9BYR6 BBS7-201ENST00000264499 3752 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KRTAP3-3Q9BYR6 DAZ2-207ENST00000382449 3791 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
KRTAP3-3Q9BYR6 TMEM144-201ENST00000296529 3442 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KRTAP3-3Q9BYR6 SERPINA1-208ENST00000448921 3532 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KRTAP3-3Q9BYR6 ZNF286A-221ENST00000593105 5222 ntTSL 3 BASIC4.48□□□□□ -1.69
KRTAP3-3Q9BYR6 MAPT-AS1-204ENST00000634876 3602 ntTSL 5 BASIC4.48□□□□□ -1.69
KRTAP3-3Q9BYR6 ECM2-201ENST00000344604 3253 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
KRTAP3-3Q9BYR6 TXNRD1-208ENST00000525566 3836 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
KRTAP3-3Q9BYR6 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.48□□□□□ -1.69
KRTAP3-3Q9BYR6 KIAA0355-201ENST00000299505 6717 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KRTAP3-3Q9BYR6 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.48□□□□□ -1.69
KRTAP3-3Q9BYR6 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.48□□□□□ -1.69
KRTAP3-3Q9BYR6 ADNP-206ENST00000621696 6224 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
KRTAP3-3Q9BYR6 PTPN20-205ENST00000395721 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
KRTAP3-3Q9BYR6 RN7SKP23-201ENST00000625159 4301 ntBASIC4.48□□□□□ -1.69
KRTAP3-3Q9BYR6 ANKS1B-211ENST00000547776 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 BCOR-205ENST00000397354 6258 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 TOX4-212ENST00000613569 4711 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 DCAF8-203ENST00000368074 3824 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 CBFA2T2-206ENST00000397800 7449 ntTSL 5 BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 PRAMEF10-201ENST00000235347 1525 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 FMNL3-201ENST00000335154 12634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 LARS-202ENST00000394434 4766 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 ACLY-202ENST00000353196 4318 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 TAOK1-201ENST00000261716 12407 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 SWT1-202ENST00000367501 3001 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 PARP1P1-201ENST00000413631 3026 ntBASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 C9orf72-206ENST00000619707 3339 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 LINC01695-203ENST00000453420 4486 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 LACTB2-AS1-201ENST00000499227 3716 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 MIR342-201ENST00000362212 99 ntBASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 Y_RNA.168-201ENST00000363740 102 ntBASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 SNORD115-31-201ENST00000365318 82 ntBASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 AL031777.1-201ENST00000405418 499 ntBASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 AC104794.1-201ENST00000425235 312 ntTSL 3 BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 AC245036.3-201ENST00000429259 146 ntBASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 AC004006.1-201ENST00000434994 377 ntBASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 AL592114.3-201ENST00000437919 446 ntTSL 3 BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 AL008718.1-201ENST00000445867 487 ntBASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 SLAMF6P1-201ENST00000451067 602 ntBASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 SMIM10L2B-AS1-201ENST00000453528 1027 ntTSL 5 BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 AC104212.1-201ENST00000472088 613 ntBASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 RN7SL790P-201ENST00000474043 298 ntBASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 PFN1P9-201ENST00000475753 433 ntBASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 AC044836.1-201ENST00000519514 274 ntBASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 RAD52-218ENST00000545564 681 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 BNIP3P1-201ENST00000547295 580 ntBASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 RPL23AP97-201ENST00000568955 471 ntBASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 MIR548AE2-201ENST00000583456 67 ntBASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 LSP1P1-201ENST00000599825 133 ntBASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 AC010615.4-201ENST00000600810 472 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 AC093458.1-201ENST00000608912 222 ntBASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 AC000041.2-201ENST00000619824 151 ntBASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 AC007347.2-201ENST00000623044 180 ntBASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 VIPR1-AS1-229ENST00000628282 515 ntTSL 5 BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 ABBA01040607.1-201ENST00000640749 321 ntBASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 PREPL-208ENST00000410081 3080 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 SLC38A2-201ENST00000256689 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 LIPH-201ENST00000296252 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 OR9I1-202ENST00000641439 3184 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 SMAD9-203ENST00000399275 5389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 PAX6-231ENST00000606377 6901 ntAPPRIS P4 TSL 5 BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 FAM13C-217ENST00000618804 3333 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 LOXHD1-211ENST00000579038 3632 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 BUB1B-201ENST00000287598 3725 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 SH3KBP1-203ENST00000379716 3819 ntTSL 2 BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 ISX-201ENST00000308700 3384 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 AL596244.1-201ENST00000567068 3779 ntBASIC4.47□□□□□ -1.69
KRTAP3-3Q9BYR6 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
KRTAP3-3Q9BYR6 SNHG14-210ENST00000546682 8842 ntTSL 5 BASIC4.46□□□□□ -1.69
KRTAP3-3Q9BYR6 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
KRTAP3-3Q9BYR6 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC4.46□□□□□ -1.69
KRTAP3-3Q9BYR6 PAPD4-204ENST00000453514 3523 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.69
KRTAP3-3Q9BYR6 PPP2R2A-202ENST00000380737 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
KRTAP3-3Q9BYR6 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC4.46□□□□□ -1.69
KRTAP3-3Q9BYR6 TEP1-209ENST00000556935 7643 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
KRTAP3-3Q9BYR6 MYO5B-201ENST00000285039 9505 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
KRTAP3-3Q9BYR6 RRN3-201ENST00000198767 3762 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
KRTAP3-3Q9BYR6 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
KRTAP3-3Q9BYR6 PABPC3-201ENST00000281589 3387 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
KRTAP3-3Q9BYR6 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
KRTAP3-3Q9BYR6 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
KRTAP3-3Q9BYR6 PTBP2-201ENST00000370197 3057 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
KRTAP3-3Q9BYR6 NCKAP5-204ENST00000409213 2390 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
KRTAP3-3Q9BYR6 VIL1-201ENST00000248444 6531 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
KRTAP3-3Q9BYR6 AC241584.2-201ENST00000637142 2090 ntBASIC4.46□□□□□ -1.7
KRTAP3-3Q9BYR6 TEX2-201ENST00000258991 5232 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms