Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 AL592295.1-201ENST00000400984 884 ntBASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 PCDHB19P-201ENST00000570871 2371 ntBASIC9.99□□□□□ -0.81
LINC01558Q9Y6Z2 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 TCAF2P1-201ENST00000291129 2421 ntBASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 LINC00554-201ENST00000564841 3011 ntBASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 C8orf49-201ENST00000525043 1968 ntBASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 AC009102.2-201ENST00000606772 1639 ntBASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 DUX4L13-201ENST00000554103 1267 ntBASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 DUX4L4-201ENST00000566884 1269 ntBASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 DUX4L15-201ENST00000611059 1267 ntBASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 DUX4L23-201ENST00000615195 1269 ntBASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 DUX4L24-201ENST00000617576 1269 ntBASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 DUX4L22-201ENST00000618238 1269 ntBASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 DUX4L20-201ENST00000619712 1269 ntBASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 DUX4L21-201ENST00000622058 1269 ntBASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 DUX4L10-201ENST00000622460 1267 ntBASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 DUX4L25-201ENST00000624915 1269 ntBASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01558Q9Y6Z2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01558Q9Y6Z2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC9.97□□□□□ -0.81
LINC01558Q9Y6Z2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC9.97□□□□□ -0.81
LINC01558Q9Y6Z2 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC9.97□□□□□ -0.81
LINC01558Q9Y6Z2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01558Q9Y6Z2 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01558Q9Y6Z2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01558Q9Y6Z2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01558Q9Y6Z2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01558Q9Y6Z2 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC9.97□□□□□ -0.81
LINC01558Q9Y6Z2 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC9.97□□□□□ -0.81
LINC01558Q9Y6Z2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC9.97□□□□□ -0.81
LINC01558Q9Y6Z2 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01558Q9Y6Z2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01558Q9Y6Z2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC9.97□□□□□ -0.81
LINC01558Q9Y6Z2 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC9.97□□□□□ -0.81
LINC01558Q9Y6Z2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
LINC01558Q9Y6Z2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC9.97□□□□□ -0.81
LINC01558Q9Y6Z2 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC9.97□□□□□ -0.81
LINC01558Q9Y6Z2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01558Q9Y6Z2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01558Q9Y6Z2 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC9.97□□□□□ -0.81
LINC01558Q9Y6Z2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01558Q9Y6Z2 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01558Q9Y6Z2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC9.97□□□□□ -0.81
LINC01558Q9Y6Z2 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01558Q9Y6Z2 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC9.97□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms