Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DNMT3AQ9Y6K1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
DNMT3AQ9Y6K1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DNMT3AQ9Y6K1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
DNMT3AQ9Y6K1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
DNMT3AQ9Y6K1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DNMT3AQ9Y6K1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DNMT3AQ9Y6K1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.85■□□□□ 0.61
DNMT3AQ9Y6K1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DNMT3AQ9Y6K1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DNMT3AQ9Y6K1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.85■□□□□ 0.61
DNMT3AQ9Y6K1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DNMT3AQ9Y6K1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DNMT3AQ9Y6K1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 AP000525.1-201ENST00000608286 694 ntBASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 SDHAP1-207ENST00000440850 2000 ntBASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.84■□□□□ 0.61
DNMT3AQ9Y6K1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
DNMT3AQ9Y6K1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DNMT3AQ9Y6K1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
DNMT3AQ9Y6K1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.83■□□□□ 0.61
DNMT3AQ9Y6K1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
DNMT3AQ9Y6K1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DNMT3AQ9Y6K1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DNMT3AQ9Y6K1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.83■□□□□ 0.6
DNMT3AQ9Y6K1 SLC25A1P4-201ENST00000567977 778 ntBASIC18.83■□□□□ 0.6
DNMT3AQ9Y6K1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.83■□□□□ 0.6
DNMT3AQ9Y6K1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
DNMT3AQ9Y6K1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
DNMT3AQ9Y6K1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
DNMT3AQ9Y6K1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
DNMT3AQ9Y6K1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
DNMT3AQ9Y6K1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DNMT3AQ9Y6K1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DNMT3AQ9Y6K1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.83■□□□□ 0.6
DNMT3AQ9Y6K1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DNMT3AQ9Y6K1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
DNMT3AQ9Y6K1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 MIR1238-201ENST00000408483 83 ntBASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 CKBP1-201ENST00000565489 1086 ntBASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms