Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGC4Q9Y5F7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGC4Q9Y5F7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGC4Q9Y5F7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHGC4Q9Y5F7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 FSCN1P1-201ENST00000568912 1481 ntBASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 AC004951.3-201ENST00000418645 1148 ntBASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 AC091390.4-202ENST00000476426 537 ntBASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 AL355075.4-201ENST00000554988 638 ntBASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 AC011298.2-201ENST00000617989 482 ntBASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGC4Q9Y5F7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGC4Q9Y5F7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PCDHGC4Q9Y5F7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGC4Q9Y5F7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHGC4Q9Y5F7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGC4Q9Y5F7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGC4Q9Y5F7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGC4Q9Y5F7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGC4Q9Y5F7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHGC4Q9Y5F7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.41■□□□□ 0.7
PCDHGC4Q9Y5F7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHGC4Q9Y5F7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGC4Q9Y5F7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHGC4Q9Y5F7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGC4Q9Y5F7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGC4Q9Y5F7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHGC4Q9Y5F7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGC4Q9Y5F7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGC4Q9Y5F7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGC4Q9Y5F7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGC4Q9Y5F7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGC4Q9Y5F7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGC4Q9Y5F7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGC4Q9Y5F7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PCDHGC4Q9Y5F7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHGC4Q9Y5F7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHGC4Q9Y5F7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDHGC4Q9Y5F7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHGC4Q9Y5F7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHGC4Q9Y5F7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDHGC4Q9Y5F7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDHGC4Q9Y5F7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.4■□□□□ 0.7
PCDHGC4Q9Y5F7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHGC4Q9Y5F7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGC4Q9Y5F7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDHGC4Q9Y5F7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGC4Q9Y5F7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGC4Q9Y5F7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHGC4Q9Y5F7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHGC4Q9Y5F7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHGC4Q9Y5F7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHGC4Q9Y5F7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHGC4Q9Y5F7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHGC4Q9Y5F7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.39■□□□□ 0.7
PCDHGC4Q9Y5F7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
PCDHGC4Q9Y5F7 AC005332.7-201ENST00000614046 2005 ntBASIC19.39■□□□□ 0.69
PCDHGC4Q9Y5F7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
PCDHGC4Q9Y5F7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
PCDHGC4Q9Y5F7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGC4Q9Y5F7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PCDHGC4Q9Y5F7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGC4Q9Y5F7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
PCDHGC4Q9Y5F7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PCDHGC4Q9Y5F7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.39■□□□□ 0.69
PCDHGC4Q9Y5F7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGC4Q9Y5F7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.39■□□□□ 0.69
PCDHGC4Q9Y5F7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.39■□□□□ 0.69
PCDHGC4Q9Y5F7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHGC4Q9Y5F7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHGC4Q9Y5F7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHGC4Q9Y5F7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGC4Q9Y5F7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGC4Q9Y5F7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGC4Q9Y5F7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGC4Q9Y5F7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGC4Q9Y5F7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHGC4Q9Y5F7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms