Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RCL1Q9Y2P8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.73■□□□□ 0.11
RCL1Q9Y2P8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.73■□□□□ 0.11
RCL1Q9Y2P8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.73■□□□□ 0.11
RCL1Q9Y2P8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RCL1Q9Y2P8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RCL1Q9Y2P8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RCL1Q9Y2P8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC15.73■□□□□ 0.11
RCL1Q9Y2P8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
RCL1Q9Y2P8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC15.73■□□□□ 0.11
RCL1Q9Y2P8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RCL1Q9Y2P8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC15.73■□□□□ 0.11
RCL1Q9Y2P8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RCL1Q9Y2P8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RCL1Q9Y2P8 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RCL1Q9Y2P8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RCL1Q9Y2P8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RCL1Q9Y2P8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.73■□□□□ 0.11
RCL1Q9Y2P8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RCL1Q9Y2P8 AL512353.2-201ENST00000448759 1962 ntBASIC15.73■□□□□ 0.11
RCL1Q9Y2P8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RCL1Q9Y2P8 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RCL1Q9Y2P8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RCL1Q9Y2P8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 GAS2L1P2-201ENST00000436355 1356 ntBASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RCL1Q9Y2P8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RCL1Q9Y2P8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
RCL1Q9Y2P8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.71■□□□□ 0.11
RCL1Q9Y2P8 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RCL1Q9Y2P8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RCL1Q9Y2P8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RCL1Q9Y2P8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.71■□□□□ 0.11
RCL1Q9Y2P8 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.71■□□□□ 0.11
RCL1Q9Y2P8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RCL1Q9Y2P8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.71■□□□□ 0.11
RCL1Q9Y2P8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC15.71■□□□□ 0.11
RCL1Q9Y2P8 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RCL1Q9Y2P8 TERF1P2-201ENST00000583350 1212 ntBASIC15.71■□□□□ 0.11
RCL1Q9Y2P8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.71■□□□□ 0.11
RCL1Q9Y2P8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.71■□□□□ 0.11
RCL1Q9Y2P8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
RCL1Q9Y2P8 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RCL1Q9Y2P8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
RCL1Q9Y2P8 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RCL1Q9Y2P8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
RCL1Q9Y2P8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RCL1Q9Y2P8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.71■□□□□ 0.1
RCL1Q9Y2P8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
RCL1Q9Y2P8 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
RCL1Q9Y2P8 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 AC004854.2-201ENST00000608450 1441 ntBASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 COX20-201ENST00000366528 568 ntTSL 2 BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 AC110285.6-201ENST00000617652 491 ntBASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms