Protein–RNA interactions for Protein: Q9Y223

GNE, Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase, humanhuman

Known RBP Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GNEQ9Y223 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.43■■□□□ 1.02
GNEQ9Y223 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
GNEQ9Y223 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
GNEQ9Y223 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.43■■□□□ 1.02
GNEQ9Y223 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.43■■□□□ 1.02
GNEQ9Y223 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
GNEQ9Y223 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.43■■□□□ 1.02
GNEQ9Y223 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.43■■□□□ 1.02
GNEQ9Y223 CR769767.2-201ENST00000622735 460 ntBASIC21.43■■□□□ 1.02
GNEQ9Y223 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GNEQ9Y223 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.43■■□□□ 1.02
GNEQ9Y223 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.43■■□□□ 1.02
GNEQ9Y223 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.43■■□□□ 1.02
GNEQ9Y223 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GNEQ9Y223 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GNEQ9Y223 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GNEQ9Y223 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
GNEQ9Y223 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GNEQ9Y223 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
GNEQ9Y223 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
GNEQ9Y223 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
GNEQ9Y223 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GNEQ9Y223 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
GNEQ9Y223 HCG4P8-203ENST00000443049 980 ntBASIC21.42■■□□□ 1.02
GNEQ9Y223 SPDYE13P-201ENST00000445314 798 ntBASIC21.42■■□□□ 1.02
GNEQ9Y223 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.42■■□□□ 1.02
GNEQ9Y223 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.42■■□□□ 1.02
GNEQ9Y223 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.42■■□□□ 1.02
GNEQ9Y223 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.42■■□□□ 1.02
GNEQ9Y223 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.42■■□□□ 1.02
GNEQ9Y223 LINC01311-201ENST00000565162 1445 ntBASIC21.42■■□□□ 1.02
GNEQ9Y223 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.42■■□□□ 1.02
GNEQ9Y223 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.42■■□□□ 1.02
GNEQ9Y223 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
GNEQ9Y223 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.42■■□□□ 1.02
GNEQ9Y223 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
GNEQ9Y223 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GNEQ9Y223 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GNEQ9Y223 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GNEQ9Y223 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GNEQ9Y223 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
GNEQ9Y223 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.41■■□□□ 1.02
GNEQ9Y223 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.41■■□□□ 1.02
GNEQ9Y223 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
GNEQ9Y223 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.41■■□□□ 1.02
GNEQ9Y223 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GNEQ9Y223 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GNEQ9Y223 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GNEQ9Y223 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GNEQ9Y223 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GNEQ9Y223 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.41■■□□□ 1.02
GNEQ9Y223 TSPY23P-201ENST00000440136 739 ntBASIC21.41■■□□□ 1.02
GNEQ9Y223 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.41■■□□□ 1.02
GNEQ9Y223 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GNEQ9Y223 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GNEQ9Y223 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GNEQ9Y223 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
GNEQ9Y223 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GNEQ9Y223 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.41■■□□□ 1.02
GNEQ9Y223 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.4■■□□□ 1.02
GNEQ9Y223 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GNEQ9Y223 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.4■■□□□ 1.02
GNEQ9Y223 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
GNEQ9Y223 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
GNEQ9Y223 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.4■■□□□ 1.02
GNEQ9Y223 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GNEQ9Y223 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.4■■□□□ 1.02
GNEQ9Y223 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GNEQ9Y223 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GNEQ9Y223 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
GNEQ9Y223 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
GNEQ9Y223 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.4■■□□□ 1.02
GNEQ9Y223 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.4■■□□□ 1.02
GNEQ9Y223 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.4■■□□□ 1.02
GNEQ9Y223 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.4■■□□□ 1.02
GNEQ9Y223 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
GNEQ9Y223 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
GNEQ9Y223 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
GNEQ9Y223 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.4■■□□□ 1.02
GNEQ9Y223 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.4■■□□□ 1.02
GNEQ9Y223 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.4■■□□□ 1.02
GNEQ9Y223 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.02
GNEQ9Y223 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
GNEQ9Y223 AC099778.1-201ENST00000568593 1911 ntBASIC21.39■■□□□ 1.02
GNEQ9Y223 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
GNEQ9Y223 ZNF815P-204ENST00000434898 1737 ntBASIC21.39■■□□□ 1.01
GNEQ9Y223 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GNEQ9Y223 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GNEQ9Y223 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.39■■□□□ 1.01
GNEQ9Y223 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.39■■□□□ 1.01
GNEQ9Y223 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.39■■□□□ 1.01
GNEQ9Y223 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.39■■□□□ 1.01
GNEQ9Y223 CLEC4GP1-201ENST00000596555 870 ntBASIC21.39■■□□□ 1.01
GNEQ9Y223 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
GNEQ9Y223 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GNEQ9Y223 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
GNEQ9Y223 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
GNEQ9Y223 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
GNEQ9Y223 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GNEQ9Y223 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms