Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.7■□□□□ 0.9
GTF3C4Q9UKN8 HLA-A-209ENST00000638375 975 ntBASIC20.7■□□□□ 0.9
GTF3C4Q9UKN8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GTF3C4Q9UKN8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
GTF3C4Q9UKN8 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
GTF3C4Q9UKN8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
GTF3C4Q9UKN8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.7■□□□□ 0.9
GTF3C4Q9UKN8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
GTF3C4Q9UKN8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GTF3C4Q9UKN8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
GTF3C4Q9UKN8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
GTF3C4Q9UKN8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GTF3C4Q9UKN8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 AL031985.4-201ENST00000642138 673 ntBASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.69■□□□□ 0.9
GTF3C4Q9UKN8 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
GTF3C4Q9UKN8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GTF3C4Q9UKN8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GTF3C4Q9UKN8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
GTF3C4Q9UKN8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GTF3C4Q9UKN8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.68■□□□□ 0.9
GTF3C4Q9UKN8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.68■□□□□ 0.9
GTF3C4Q9UKN8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
GTF3C4Q9UKN8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.68■□□□□ 0.9
GTF3C4Q9UKN8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GTF3C4Q9UKN8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.68■□□□□ 0.9
GTF3C4Q9UKN8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.68■□□□□ 0.9
GTF3C4Q9UKN8 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GTF3C4Q9UKN8 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GTF3C4Q9UKN8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
GTF3C4Q9UKN8 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GTF3C4Q9UKN8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GTF3C4Q9UKN8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.68■□□□□ 0.9
GTF3C4Q9UKN8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.68■□□□□ 0.9
GTF3C4Q9UKN8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
GTF3C4Q9UKN8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GTF3C4Q9UKN8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GTF3C4Q9UKN8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GTF3C4Q9UKN8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GTF3C4Q9UKN8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
GTF3C4Q9UKN8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GTF3C4Q9UKN8 AC004980.1-204ENST00000429707 299 ntBASIC20.67■□□□□ 0.9
GTF3C4Q9UKN8 AC116562.2-201ENST00000507042 360 ntBASIC20.67■□□□□ 0.9
GTF3C4Q9UKN8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
GTF3C4Q9UKN8 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.67■□□□□ 0.9
GTF3C4Q9UKN8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.67■□□□□ 0.9
GTF3C4Q9UKN8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.67■□□□□ 0.9
GTF3C4Q9UKN8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
GTF3C4Q9UKN8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.67■□□□□ 0.9
GTF3C4Q9UKN8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.67■□□□□ 0.9
GTF3C4Q9UKN8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GTF3C4Q9UKN8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
GTF3C4Q9UKN8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GTF3C4Q9UKN8 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GTF3C4Q9UKN8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GTF3C4Q9UKN8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GTF3C4Q9UKN8 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GTF3C4Q9UKN8 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GTF3C4Q9UKN8 RBM17P1-201ENST00000453646 1190 ntBASIC20.66■□□□□ 0.9
GTF3C4Q9UKN8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GTF3C4Q9UKN8 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
GTF3C4Q9UKN8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.66■□□□□ 0.9
GTF3C4Q9UKN8 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.66■□□□□ 0.9
GTF3C4Q9UKN8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.66■□□□□ 0.9
GTF3C4Q9UKN8 AC131212.4-201ENST00000623606 975 ntBASIC20.66■□□□□ 0.9
GTF3C4Q9UKN8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.66■□□□□ 0.9
GTF3C4Q9UKN8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GTF3C4Q9UKN8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GTF3C4Q9UKN8 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
GTF3C4Q9UKN8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GTF3C4Q9UKN8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
GTF3C4Q9UKN8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GTF3C4Q9UKN8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.66■□□□□ 0.9
GTF3C4Q9UKN8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms