Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 FITM1-202ENST00000559294 800 ntBASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SPHK1Q9NYA1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
SPHK1Q9NYA1 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPHK1Q9NYA1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SPHK1Q9NYA1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.53■□□□□ 0.56
SPHK1Q9NYA1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.53■□□□□ 0.56
SPHK1Q9NYA1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPHK1Q9NYA1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SPHK1Q9NYA1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPHK1Q9NYA1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SPHK1Q9NYA1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.53■□□□□ 0.56
SPHK1Q9NYA1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPHK1Q9NYA1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SPHK1Q9NYA1 CRYGFP-201ENST00000418459 633 ntBASIC18.53■□□□□ 0.56
SPHK1Q9NYA1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.53■□□□□ 0.56
SPHK1Q9NYA1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPHK1Q9NYA1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.53■□□□□ 0.56
SPHK1Q9NYA1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SPHK1Q9NYA1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.53■□□□□ 0.56
SPHK1Q9NYA1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.53■□□□□ 0.56
SPHK1Q9NYA1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SPHK1Q9NYA1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPHK1Q9NYA1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SPHK1Q9NYA1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPHK1Q9NYA1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPHK1Q9NYA1 AC093484.2-201ENST00000580996 2166 ntBASIC18.52■□□□□ 0.56
SPHK1Q9NYA1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.52■□□□□ 0.56
SPHK1Q9NYA1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPHK1Q9NYA1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPHK1Q9NYA1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.52■□□□□ 0.56
SPHK1Q9NYA1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.52■□□□□ 0.56
SPHK1Q9NYA1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPHK1Q9NYA1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.52■□□□□ 0.56
SPHK1Q9NYA1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.52■□□□□ 0.56
SPHK1Q9NYA1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
SPHK1Q9NYA1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.52■□□□□ 0.56
SPHK1Q9NYA1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SPHK1Q9NYA1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.52■□□□□ 0.55
SPHK1Q9NYA1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SPHK1Q9NYA1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
SPHK1Q9NYA1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SPHK1Q9NYA1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SPHK1Q9NYA1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SPHK1Q9NYA1 CYP2D8P-201ENST00000433633 1490 ntBASIC18.52■□□□□ 0.55
SPHK1Q9NYA1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SPHK1Q9NYA1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SPHK1Q9NYA1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.51■□□□□ 0.55
SPHK1Q9NYA1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
SPHK1Q9NYA1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
SPHK1Q9NYA1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.51■□□□□ 0.55
SPHK1Q9NYA1 KRT8P11-201ENST00000409686 1436 ntBASIC18.51■□□□□ 0.55
SPHK1Q9NYA1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.51■□□□□ 0.55
SPHK1Q9NYA1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPHK1Q9NYA1 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPHK1Q9NYA1 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPHK1Q9NYA1 AC211429.1-201ENST00000415277 523 ntBASIC18.51■□□□□ 0.55
SPHK1Q9NYA1 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
SPHK1Q9NYA1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.51■□□□□ 0.55
SPHK1Q9NYA1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.51■□□□□ 0.55
SPHK1Q9NYA1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.51■□□□□ 0.55
SPHK1Q9NYA1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.51■□□□□ 0.55
SPHK1Q9NYA1 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.51■□□□□ 0.55
SPHK1Q9NYA1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPHK1Q9NYA1 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SPHK1Q9NYA1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.51■□□□□ 0.55
SPHK1Q9NYA1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SPHK1Q9NYA1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPHK1Q9NYA1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.51■□□□□ 0.55
SPHK1Q9NYA1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPHK1Q9NYA1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.5■□□□□ 0.55
SPHK1Q9NYA1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SPHK1Q9NYA1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPHK1Q9NYA1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPHK1Q9NYA1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SPHK1Q9NYA1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPHK1Q9NYA1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SPHK1Q9NYA1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SPHK1Q9NYA1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPHK1Q9NYA1 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPHK1Q9NYA1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPHK1Q9NYA1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SPHK1Q9NYA1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPHK1Q9NYA1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPHK1Q9NYA1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
SPHK1Q9NYA1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms