Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VPS45Q9NRW7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
VPS45Q9NRW7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VPS45Q9NRW7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VPS45Q9NRW7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.83■□□□□ 0.77
VPS45Q9NRW7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
VPS45Q9NRW7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
VPS45Q9NRW7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.83■□□□□ 0.77
VPS45Q9NRW7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.83■□□□□ 0.77
VPS45Q9NRW7 LIN28AP1-201ENST00000429574 405 ntBASIC19.83■□□□□ 0.77
VPS45Q9NRW7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
VPS45Q9NRW7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.83■□□□□ 0.77
VPS45Q9NRW7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.83■□□□□ 0.77
VPS45Q9NRW7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.83■□□□□ 0.77
VPS45Q9NRW7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.83■□□□□ 0.77
VPS45Q9NRW7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.83■□□□□ 0.77
VPS45Q9NRW7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
VPS45Q9NRW7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
VPS45Q9NRW7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.83■□□□□ 0.76
VPS45Q9NRW7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.83■□□□□ 0.76
VPS45Q9NRW7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
VPS45Q9NRW7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
VPS45Q9NRW7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VPS45Q9NRW7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VPS45Q9NRW7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
VPS45Q9NRW7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS45Q9NRW7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS45Q9NRW7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS45Q9NRW7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.82■□□□□ 0.76
VPS45Q9NRW7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS45Q9NRW7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
VPS45Q9NRW7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS45Q9NRW7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS45Q9NRW7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS45Q9NRW7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
VPS45Q9NRW7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.82■□□□□ 0.76
VPS45Q9NRW7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VPS45Q9NRW7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.82■□□□□ 0.76
VPS45Q9NRW7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.82■□□□□ 0.76
VPS45Q9NRW7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
VPS45Q9NRW7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.82■□□□□ 0.76
VPS45Q9NRW7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS45Q9NRW7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS45Q9NRW7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
VPS45Q9NRW7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS45Q9NRW7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS45Q9NRW7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
VPS45Q9NRW7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS45Q9NRW7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS45Q9NRW7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS45Q9NRW7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.81■□□□□ 0.76
VPS45Q9NRW7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
VPS45Q9NRW7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS45Q9NRW7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS45Q9NRW7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.81■□□□□ 0.76
VPS45Q9NRW7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.81■□□□□ 0.76
VPS45Q9NRW7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.81■□□□□ 0.76
VPS45Q9NRW7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.81■□□□□ 0.76
VPS45Q9NRW7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.81■□□□□ 0.76
VPS45Q9NRW7 ATP5G1P1-201ENST00000448724 379 ntBASIC19.81■□□□□ 0.76
VPS45Q9NRW7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
VPS45Q9NRW7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.81■□□□□ 0.76
VPS45Q9NRW7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.81■□□□□ 0.76
VPS45Q9NRW7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS45Q9NRW7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.81■□□□□ 0.76
VPS45Q9NRW7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS45Q9NRW7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS45Q9NRW7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS45Q9NRW7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS45Q9NRW7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VPS45Q9NRW7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
VPS45Q9NRW7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VPS45Q9NRW7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VPS45Q9NRW7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VPS45Q9NRW7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
VPS45Q9NRW7 KRT16P1-201ENST00000399124 1418 ntBASIC19.8■□□□□ 0.76
VPS45Q9NRW7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
VPS45Q9NRW7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VPS45Q9NRW7 NIFKP9-201ENST00000419265 221 ntBASIC19.8■□□□□ 0.76
VPS45Q9NRW7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.8■□□□□ 0.76
VPS45Q9NRW7 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.8■□□□□ 0.76
VPS45Q9NRW7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.8■□□□□ 0.76
VPS45Q9NRW7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.8■□□□□ 0.76
VPS45Q9NRW7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
VPS45Q9NRW7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VPS45Q9NRW7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
VPS45Q9NRW7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
VPS45Q9NRW7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
VPS45Q9NRW7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.8■□□□□ 0.76
VPS45Q9NRW7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms