Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 MIR600HG-201ENST00000449175 5984 ntBASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 EBPL-203ENST00000378270 579 ntTSL 2 BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
CDC42SE1Q9NRR8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
CDC42SE1Q9NRR8 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
CDC42SE1Q9NRR8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
CDC42SE1Q9NRR8 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
CDC42SE1Q9NRR8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
CDC42SE1Q9NRR8 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
CDC42SE1Q9NRR8 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.83
CDC42SE1Q9NRR8 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
CDC42SE1Q9NRR8 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC9.9□□□□□ -0.83
CDC42SE1Q9NRR8 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
CDC42SE1Q9NRR8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
CDC42SE1Q9NRR8 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
CDC42SE1Q9NRR8 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC9.9□□□□□ -0.83
CDC42SE1Q9NRR8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC9.9□□□□□ -0.83
CDC42SE1Q9NRR8 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
CDC42SE1Q9NRR8 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
CDC42SE1Q9NRR8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC9.9□□□□□ -0.83
CDC42SE1Q9NRR8 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
CDC42SE1Q9NRR8 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.83
CDC42SE1Q9NRR8 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
CDC42SE1Q9NRR8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 UBALD1-205ENST00000590891 2641 ntBASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 LINC00273-201ENST00000539813 1452 ntBASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms